Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AL592447.1-201ENST00000447592 540 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 RNU6-420P-201ENST00000458780 107 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 RPS15AP17-201ENST00000470598 390 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AC010486.1-201ENST00000511793 424 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AP000889.1-201ENST00000530968 660 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AC024224.1-201ENST00000538284 609 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AL138976.2-201ENST00000563989 694 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 MTND1P8-201ENST00000571424 950 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 MIR3921-201ENST00000577308 85 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AP001269.3-201ENST00000588718 329 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AC131235.4-201ENST00000609288 620 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AL050303.3-201ENST00000613704 284 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 MIR6873-201ENST00000622788 63 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 MIR1322-201ENST00000638013 71 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 DDX10P1-201ENST00000448545 1933 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 Y_RNA.192-201ENST00000363977 102 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 RNU6-560P-201ENST00000364007 108 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 RNU1-73P-201ENST00000383971 164 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AL445529.1-201ENST00000398713 389 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 RNU4-53P-201ENST00000410828 140 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 SSR1P2-201ENST00000415208 787 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 USP12PX-201ENST00000432383 1057 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 Z80107.1-201ENST00000436830 412 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 PTENP1-201ENST00000447117 1215 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AC007327.1-201ENST00000447461 264 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 EEF1B2P7-201ENST00000451177 676 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 USP9YP34-201ENST00000453983 808 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AC091951.3-201ENST00000504093 246 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AC021146.8-201ENST00000507455 733 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 SLC2A13P1-201ENST00000531560 322 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 SETP7-201ENST00000552169 453 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 HIGD1AP17-201ENST00000554576 276 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 OR4K8P-201ENST00000578842 1048 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 BNIP3P26-201ENST00000600827 554 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 RPP40P2-201ENST00000603596 712 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AC021749.1-201ENST00000604322 607 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 APOOP1-201ENST00000604695 592 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AC069304.2-201ENST00000605154 435 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AL450336.1-201ENST00000605180 586 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AC090132.2-201ENST00000615881 347 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AC098657.3-201ENST00000620434 263 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 AC116618.1-201ENST00000634617 774 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 OR5H6-203ENST00000642105 978 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 CDR1-202ENST00000625883 1485 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SMARCD3Q6STE5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SMARCD3Q6STE5 KPNA2P1-201ENST00000458289 1591 ntBASIC1.86□□□□□ -2.11
SMARCD3Q6STE5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.86□□□□□ -2.11
SMARCD3Q6STE5 OR4G11P-202ENST00000642116 1414 ntBASIC1.86□□□□□ -2.11
SMARCD3Q6STE5 SNORA16B-201ENST00000364674 135 ntBASIC1.86□□□□□ -2.11
SMARCD3Q6STE5 MIR506-201ENST00000384998 124 ntBASIC1.86□□□□□ -2.11
SMARCD3Q6STE5 MIR325-201ENST00000385260 98 ntBASIC1.86□□□□□ -2.11
SMARCD3Q6STE5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SMARCD3Q6STE5 SNORA46.1-201ENST00000391069 153 ntBASIC1.86□□□□□ -2.11
SMARCD3Q6STE5 MTCYBP45-201ENST00000435243 565 ntBASIC1.86□□□□□ -2.11
SMARCD3Q6STE5 MTCO2P20-201ENST00000437339 673 ntBASIC1.86□□□□□ -2.11
SMARCD3Q6STE5 RPL26P6-201ENST00000440913 438 ntBASIC1.86□□□□□ -2.11
SMARCD3Q6STE5 USP9YP8-201ENST00000441913 500 ntBASIC1.86□□□□□ -2.11
SMARCD3Q6STE5 OSTCP8-201ENST00000445117 448 ntBASIC1.86□□□□□ -2.11
SMARCD3Q6STE5 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.86□□□□□ -2.11
SMARCD3Q6STE5 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms