Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DDX10P1-201ENST00000448545 1933 ntBASIC5.21□□□□□ -1.57
FOXR1Q6PIV2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
FOXR1Q6PIV2 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 LINC01963-201ENST00000562038 3148 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 RNU6-153P-201ENST00000364422 104 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 RNY3P4-201ENST00000384428 101 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 RNU6-658P-201ENST00000384606 106 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 AC099677.1-201ENST00000420575 175 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 AL035461.1-201ENST00000421490 332 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 SRSF1P1-201ENST00000424058 520 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 CR769767.1-201ENST00000436337 346 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 RNU7-87P-201ENST00000459343 62 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 RPL23AP2-201ENST00000471227 466 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 FTH1P24-201ENST00000503502 462 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 AL671862.1-201ENST00000515851 349 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 RPL23AP53-201ENST00000521854 457 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 SNRPGP16-201ENST00000533275 226 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 MIR5692A1-201ENST00000580523 69 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 MIR4480-201ENST00000582492 71 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 AC091979.2-201ENST00000607514 214 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 AC084757.4-201ENST00000616350 526 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 IGHVIII-44-202ENST00000636235 289 ntBASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXR1Q6PIV2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 AC100821.1-201ENST00000523153 2479 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 AC009951.1-201ENST00000623674 2614 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 Y_RNA.261-201ENST00000364631 102 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 Y_RNA.353-201ENST00000365440 108 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 SNORD116-18-201ENST00000383961 92 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 SNORA56-201ENST00000383966 129 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 RNU6-1035P-201ENST00000384477 107 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 Y_RNA.568-201ENST00000384742 113 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 MIR186-201ENST00000384988 86 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 MIR105-1-201ENST00000385222 81 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 HSPA8P15-201ENST00000401676 786 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 AL033519.2-201ENST00000403958 392 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 AL035079.1-201ENST00000405210 287 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 HSPE1P8-201ENST00000406997 288 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 U3.36-201ENST00000408418 213 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 RNU5E-9P-201ENST00000411164 104 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 RANP8-201ENST00000444720 713 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 AC009127.1-201ENST00000467090 155 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 RPL23AP65-201ENST00000475608 468 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 AC073073.1-201ENST00000493920 463 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 RNA5SP272-201ENST00000516095 111 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 RNU1-86P-201ENST00000516108 154 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 RNU1-107P-201ENST00000516617 154 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 CYCSP40-201ENST00000575927 294 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 MIR3934-201ENST00000579806 107 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 MIR4308-201ENST00000580634 81 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 AC108706.1-201ENST00000611053 297 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 AC243829.7-201ENST00000633081 225 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 AL022322.2-201ENST00000624072 20397 ntBASIC5.2□□□□□ -1.58
FOXR1Q6PIV2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms