Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNU6-347P-201ENST00000516658 105 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 DEFB108D-201ENST00000527787 222 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF43Q68DV7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF43Q68DV7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF43Q68DV7 AL670379.6-201ENST00000603753 252 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 AL670379.1-201ENST00000604752 252 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 AL670379.5-201ENST00000605253 252 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 AL670379.8-201ENST00000605353 252 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 AL670379.7-201ENST00000605823 252 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 AC002044.1-201ENST00000606707 158 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 MIR1244-1-201ENST00000612829 85 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF43Q68DV7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF43Q68DV7 MIR1244-3-201ENST00000635744 85 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 MIR1244-2-201ENST00000636449 85 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 MIR1244-4-202ENST00000636813 85 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF43Q68DV7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF43Q68DV7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF43Q68DV7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF43Q68DV7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF43Q68DV7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF43Q68DV7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF43Q68DV7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF43Q68DV7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF43Q68DV7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF43Q68DV7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF43Q68DV7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF43Q68DV7 MIR129-1-201ENST00000384972 72 ntBASIC4.87□□□□□ -1.63
RNF43Q68DV7 MIR625-201ENST00000385047 85 ntBASIC4.87□□□□□ -1.63
RNF43Q68DV7 RNA5SP397-201ENST00000391323 118 ntBASIC4.87□□□□□ -1.63
RNF43Q68DV7 EIF1P2-201ENST00000428233 350 ntBASIC4.87□□□□□ -1.63
RNF43Q68DV7 RPL35AP22-201ENST00000436855 335 ntBASIC4.87□□□□□ -1.63
RNF43Q68DV7 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF43Q68DV7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF43Q68DV7 AC022431.1-201ENST00000450941 438 ntBASIC4.87□□□□□ -1.63
RNF43Q68DV7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF43Q68DV7 AC010618.1-201ENST00000469924 477 ntBASIC4.87□□□□□ -1.63
RNF43Q68DV7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF43Q68DV7 AC109327.1-201ENST00000471666 403 ntBASIC4.87□□□□□ -1.63
RNF43Q68DV7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF43Q68DV7 AC144568.1-201ENST00000520139 137 ntBASIC4.87□□□□□ -1.63
RNF43Q68DV7 AC104576.1-201ENST00000524225 88 ntBASIC4.87□□□□□ -1.63
RNF43Q68DV7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF43Q68DV7 AC006023.2-201ENST00000609916 167 ntBASIC4.87□□□□□ -1.63
RNF43Q68DV7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF43Q68DV7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF43Q68DV7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF43Q68DV7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF43Q68DV7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF43Q68DV7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF43Q68DV7 LINC01355-201ENST00000566551 5444 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF43Q68DV7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
RNF43Q68DV7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF43Q68DV7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RNF43Q68DV7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF43Q68DV7 RNU6-1243P-201ENST00000364028 107 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 SNORD113.2-201ENST00000364166 89 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 RNA5SP515-201ENST00000364570 118 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 RNU6-596P-201ENST00000365395 98 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 RNU6-1329P-201ENST00000365664 107 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 RNU6-1081P-201ENST00000384537 107 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RNF43Q68DV7 MIR1298-201ENST00000408783 112 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 RPL21P24-201ENST00000413752 448 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF43Q68DV7 RPS12P5-201ENST00000423449 371 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 AC096920.1-201ENST00000423991 241 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF43Q68DV7 AL732292.1-201ENST00000426692 226 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 AC004938.1-201ENST00000438468 308 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 RPL7P49-201ENST00000471402 708 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF43Q68DV7 RPL36AP41-201ENST00000493820 306 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 AC107393.1-201ENST00000512403 346 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 Y_RNA.687-201ENST00000516558 91 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 AC034114.1-201ENST00000520293 285 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 DEFB108E-201ENST00000524692 240 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF43Q68DV7 AC007224.1-201ENST00000564410 144 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF43Q68DV7 BX284668.6-201ENST00000606899 438 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF43Q68DV7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF43Q68DV7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF43Q68DV7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF43Q68DV7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF43Q68DV7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
RNF43Q68DV7 HSPA8P1-201ENST00000425843 1833 ntBASIC4.86□□□□□ -1.63
RNF43Q68DV7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF43Q68DV7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF43Q68DV7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF43Q68DV7 LINC01109-201ENST00000603837 3081 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF43Q68DV7 Y_RNA.83-201ENST00000363005 113 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 RNA5SP391-201ENST00000363456 119 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms