Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 Y_RNA.472-201ENST00000384322 102 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 MIR128-1-201ENST00000384921 82 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 AL355497.1-201ENST00000406262 551 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 CCNG1P1-201ENST00000406783 885 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 U3.40-201ENST00000408706 208 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 AC107081.1-201ENST00000414975 361 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 BPY2DP-201ENST00000422208 265 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.87□□□□□ -2.11
SSX1Q16384 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.87□□□□□ -2.11
SSX1Q16384 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.87□□□□□ -2.11
SSX1Q16384 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.87□□□□□ -2.11
SSX1Q16384 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SSX1Q16384 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.87□□□□□ -2.11
SSX1Q16384 ZNF886P-201ENST00000450781 723 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.87□□□□□ -2.11
SSX1Q16384 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.87□□□□□ -2.11
SSX1Q16384 AC004924.1-201ENST00000480160 781 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 AL160314.1-201ENST00000490836 438 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.87□□□□□ -2.11
SSX1Q16384 AC104629.1-201ENST00000494226 508 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 AC098591.2-201ENST00000510152 315 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 AC008413.1-201ENST00000511864 177 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.87□□□□□ -2.11
SSX1Q16384 SNORA19.3-201ENST00000516165 130 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 RNA5SP148-201ENST00000516527 94 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 HMGN1P28-201ENST00000521340 364 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.87□□□□□ -2.11
SSX1Q16384 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.87□□□□□ -2.11
SSX1Q16384 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.87□□□□□ -2.11
SSX1Q16384 AC027176.1-201ENST00000560204 514 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.87□□□□□ -2.11
SSX1Q16384 AC023824.2-201ENST00000566185 400 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 MIR4319-201ENST00000577285 85 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.87□□□□□ -2.11
SSX1Q16384 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.87□□□□□ -2.11
SSX1Q16384 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.87□□□□□ -2.11
SSX1Q16384 AP000403.1-201ENST00000603349 851 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 AC005000.2-201ENST00000605468 310 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 AC239868.4-201ENST00000608318 671 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 AL121895.2-201ENST00000619558 447 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.87□□□□□ -2.11
SSX1Q16384 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.87□□□□□ -2.11
SSX1Q16384 ZNF658B-202ENST00000615961 3375 ntBASIC1.87□□□□□ -2.11
SSX1Q16384 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SSX1Q16384 MTND4P35-201ENST00000604257 1375 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SSX1Q16384 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SSX1Q16384 AC080128.1-201ENST00000474389 1917 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.86□□□□□ -2.11
SSX1Q16384 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.86□□□□□ -2.11
SSX1Q16384 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SSX1Q16384 SUMO2P12-201ENST00000405924 140 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 MIR1284-201ENST00000408337 120 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.86□□□□□ -2.11
SSX1Q16384 RPL17P12-201ENST00000413391 526 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.86□□□□□ -2.11
SSX1Q16384 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.86□□□□□ -2.11
SSX1Q16384 USP9YP11-201ENST00000427537 717 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 ZYG11AP1-201ENST00000430329 837 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.86□□□□□ -2.11
SSX1Q16384 RPL35AP22-201ENST00000436855 335 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 IPO7P1-201ENST00000442031 636 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 OSTCP8-201ENST00000445117 448 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.86□□□□□ -2.11
SSX1Q16384 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SSX1Q16384 AL109933.2-201ENST00000452651 260 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 MEMO1P3-201ENST00000459811 302 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.86□□□□□ -2.11
SSX1Q16384 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.86□□□□□ -2.11
SSX1Q16384 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.86□□□□□ -2.11
SSX1Q16384 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
SSX1Q16384 RPL7P20-201ENST00000520308 745 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.86□□□□□ -2.11
SSX1Q16384 MTND1P36-201ENST00000522384 936 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 AC118942.1-201ENST00000529674 1035 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 AP002770.2-201ENST00000543613 532 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 AGGF1P5-201ENST00000567900 919 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.86□□□□□ -2.11
SSX1Q16384 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.86□□□□□ -2.11
SSX1Q16384 AL357094.1-201ENST00000603845 844 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 OR10AB1P-201ENST00000609613 938 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 AL031601.2-202ENST00000622650 282 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 AC025034.2-201ENST00000623264 286 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
SSX1Q16384 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SSX1Q16384 AC092881.1-201ENST00000638218 2733 ntBASIC1.86□□□□□ -2.11
SSX1Q16384 DDX43P2-201ENST00000604753 1354 ntBASIC1.85□□□□□ -2.11
SSX1Q16384 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
SSX1Q16384 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.85□□□□□ -2.11
SSX1Q16384 RNU6-223P-201ENST00000362830 107 ntBASIC1.85□□□□□ -2.11
SSX1Q16384 SNORA80A-201ENST00000363922 136 ntBASIC1.85□□□□□ -2.11
SSX1Q16384 RNU6-289P-201ENST00000364093 107 ntBASIC1.85□□□□□ -2.11
SSX1Q16384 RNU6-621P-201ENST00000364752 109 ntBASIC1.85□□□□□ -2.11
SSX1Q16384 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SSX1Q16384 RNU6-432P-201ENST00000384196 109 ntBASIC1.85□□□□□ -2.11
SSX1Q16384 MIR483-201ENST00000385070 76 ntBASIC1.85□□□□□ -2.11
SSX1Q16384 RNU6-220P-201ENST00000390919 107 ntBASIC1.85□□□□□ -2.11
SSX1Q16384 SNORA48.2-201ENST00000390926 124 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms