Protein–RNA interactions for Protein: Q15858

SCN9A, Sodium channel protein type 9 subunit alpha, humanhuman

Predictions only

Length 1,988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9AQ15858 AC027309.3-201ENST00000623419 351 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 ZNF663P-202ENST00000641770 1131 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 MTCO1P23-201ENST00000415223 1526 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
SCN9AQ15858 AL133264.1-201ENST00000407157 562 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN9AQ15858 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN9AQ15858 AC092634.2-201ENST00000428146 1010 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 RPL17P35-201ENST00000432217 549 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 MTCYBP15-201ENST00000433123 1127 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.79□□□□□ -2.12
SCN9AQ15858 AC092757.1-201ENST00000467293 467 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 AC108729.2-201ENST00000476543 840 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN9AQ15858 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN9AQ15858 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN9AQ15858 AC022483.1-201ENST00000514020 567 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 RNU6-362P-201ENST00000516736 90 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.79□□□□□ -2.12
SCN9AQ15858 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.79□□□□□ -2.12
SCN9AQ15858 OR4R1P-201ENST00000529879 463 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SCN9AQ15858 TRAV28-201ENST00000557548 323 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 SULT1C2P1-202ENST00000562418 459 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 AC079148.1-201ENST00000565944 819 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 U73023.1-201ENST00000603134 700 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 AC073968.1-201ENST00000618594 637 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 AL445493.3-201ENST00000619568 477 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 uc_338.20-201ENST00000621563 178 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 AC097460.3-201ENST00000623099 442 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SCN9AQ15858 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.78□□□□□ -2.12
SCN9AQ15858 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SCN9AQ15858 RNU6-582P-201ENST00000362989 107 ntBASIC1.78□□□□□ -2.12
SCN9AQ15858 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SCN9AQ15858 RPL23AP29-201ENST00000397284 453 ntBASIC1.78□□□□□ -2.12
SCN9AQ15858 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.78□□□□□ -2.12
SCN9AQ15858 AL357078.2-201ENST00000416486 427 ntBASIC1.78□□□□□ -2.12
SCN9AQ15858 MTCO3P1-205ENST00000422088 832 ntBASIC1.78□□□□□ -2.12
SCN9AQ15858 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.78□□□□□ -2.12
SCN9AQ15858 PGBD4P3-201ENST00000440731 581 ntBASIC1.78□□□□□ -2.12
SCN9AQ15858 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.78□□□□□ -2.12
SCN9AQ15858 USP9YP34-201ENST00000453983 808 ntBASIC1.78□□□□□ -2.12
SCN9AQ15858 AC008379.1-201ENST00000463655 464 ntBASIC1.78□□□□□ -2.12
SCN9AQ15858 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN9AQ15858 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN9AQ15858 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN9AQ15858 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.78□□□□□ -2.12
SCN9AQ15858 MIR4666A-201ENST00000580160 79 ntBASIC1.78□□□□□ -2.12
SCN9AQ15858 AC010928.2-201ENST00000588017 287 ntBASIC1.78□□□□□ -2.12
SCN9AQ15858 AC068944.2-201ENST00000610373 403 ntBASIC1.78□□□□□ -2.12
SCN9AQ15858 MIR8084-201ENST00000614105 89 ntBASIC1.78□□□□□ -2.12
SCN9AQ15858 AC091925.2-201ENST00000625059 256 ntBASIC1.78□□□□□ -2.12
SCN9AQ15858 Z82195.2-201ENST00000612348 18351 ntBASIC1.78□□□□□ -2.12
SCN9AQ15858 ZNF209P-201ENST00000593450 2304 ntBASIC1.78□□□□□ -2.12
SCN9AQ15858 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SCN9AQ15858 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.78□□□□□ -2.13
SCN9AQ15858 HMGB1P5-201ENST00000255320 642 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.78□□□□□ -2.13
SCN9AQ15858 OR1L1-202ENST00000373686 1083 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 AL356320.2-201ENST00000417263 507 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.78□□□□□ -2.13
SCN9AQ15858 SFR1P2-201ENST00000421841 730 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 UBE2D3P2-201ENST00000424409 445 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 AC098614.2-201ENST00000426040 255 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 AL512661.1-201ENST00000434586 1253 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.78□□□□□ -2.13
SCN9AQ15858 AC015908.1-201ENST00000478739 476 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.78□□□□□ -2.13
SCN9AQ15858 RNU6-885P-201ENST00000516607 104 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.78□□□□□ -2.13
SCN9AQ15858 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.78□□□□□ -2.13
SCN9AQ15858 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.78□□□□□ -2.13
SCN9AQ15858 AC012669.1-201ENST00000603209 283 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 DUXAP11-201ENST00000603858 526 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 SEPT7P9-203ENST00000604116 343 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 AC012443.1-201ENST00000605605 231 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.78□□□□□ -2.13
SCN9AQ15858 AL159972.1-201ENST00000625150 448 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 AL163152.1-201ENST00000642001 374 ntBASIC1.78□□□□□ -2.13
SCN9AQ15858 CENPCP1-201ENST00000533085 2578 ntBASIC1.77□□□□□ -2.13
SCN9AQ15858 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SCN9AQ15858 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SCN9AQ15858 RNU2-42P-201ENST00000410697 113 ntBASIC1.77□□□□□ -2.13
SCN9AQ15858 AL356867.1-201ENST00000429623 299 ntBASIC1.77□□□□□ -2.13
SCN9AQ15858 NDUFA5P4-201ENST00000436704 385 ntBASIC1.77□□□□□ -2.13
SCN9AQ15858 MTCO3P43-201ENST00000440974 771 ntBASIC1.77□□□□□ -2.13
SCN9AQ15858 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.77□□□□□ -2.13
SCN9AQ15858 AC010099.1-201ENST00000455434 375 ntBASIC1.77□□□□□ -2.13
SCN9AQ15858 RNU6-420P-201ENST00000458780 107 ntBASIC1.77□□□□□ -2.13
SCN9AQ15858 TOMM22P6-201ENST00000465035 409 ntBASIC1.77□□□□□ -2.13
SCN9AQ15858 AC034244.1-201ENST00000507687 207 ntBASIC1.77□□□□□ -2.13
SCN9AQ15858 RPPH1-2P-201ENST00000516688 293 ntBASIC1.77□□□□□ -2.13
SCN9AQ15858 RNU1-92P-201ENST00000517017 135 ntBASIC1.77□□□□□ -2.13
SCN9AQ15858 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.77□□□□□ -2.13
SCN9AQ15858 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.77□□□□□ -2.13
SCN9AQ15858 AC125611.1-201ENST00000549563 229 ntBASIC1.77□□□□□ -2.13
SCN9AQ15858 FAM60BP-201ENST00000578364 658 ntBASIC1.77□□□□□ -2.13
SCN9AQ15858 AC002487.1-201ENST00000604565 994 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms