Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 RNA5SP471-201ENST00000516971 106 ntBASIC1.61□□□□□ -2.15
HMGXB3Q12766 AP003717.3-201ENST00000544832 1180 ntBASIC1.61□□□□□ -2.15
HMGXB3Q12766 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.61□□□□□ -2.15
HMGXB3Q12766 AC012443.1-201ENST00000605605 231 ntBASIC1.61□□□□□ -2.15
HMGXB3Q12766 AC245884.12-201ENST00000615364 59 ntBASIC1.61□□□□□ -2.15
HMGXB3Q12766 FAM157B-203ENST00000639350 358 ntBASIC1.61□□□□□ -2.15
HMGXB3Q12766 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMGXB3Q12766 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.61□□□□□ -2.15
HMGXB3Q12766 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
HMGXB3Q12766 SNORD56-201ENST00000413522 71 ntBASIC1.61□□□□□ -2.15
HMGXB3Q12766 AL356379.1-201ENST00000414105 126 ntBASIC1.61□□□□□ -2.15
HMGXB3Q12766 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.61□□□□□ -2.15
HMGXB3Q12766 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.61□□□□□ -2.15
HMGXB3Q12766 KATNBL1P4-201ENST00000503545 918 ntBASIC1.61□□□□□ -2.15
HMGXB3Q12766 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.61□□□□□ -2.15
HMGXB3Q12766 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
HMGXB3Q12766 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.61□□□□□ -2.15
HMGXB3Q12766 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.61□□□□□ -2.15
HMGXB3Q12766 AC005034.5-201ENST00000604219 466 ntBASIC1.61□□□□□ -2.15
HMGXB3Q12766 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.61□□□□□ -2.15
HMGXB3Q12766 RNU6-317P-201ENST00000384031 107 ntBASIC1.6□□□□□ -2.15
HMGXB3Q12766 USP9YP33-201ENST00000412220 421 ntBASIC1.6□□□□□ -2.15
HMGXB3Q12766 USP9YP35-201ENST00000435696 412 ntBASIC1.6□□□□□ -2.15
HMGXB3Q12766 MTND2P8-201ENST00000450555 1025 ntBASIC1.6□□□□□ -2.15
HMGXB3Q12766 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.6□□□□□ -2.15
HMGXB3Q12766 RPS27AP10-201ENST00000496103 208 ntBASIC1.6□□□□□ -2.15
HMGXB3Q12766 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.6□□□□□ -2.15
HMGXB3Q12766 ERHP1-201ENST00000523006 310 ntBASIC1.6□□□□□ -2.15
HMGXB3Q12766 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMGXB3Q12766 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMGXB3Q12766 AC008749.1-201ENST00000597650 306 ntBASIC1.6□□□□□ -2.15
HMGXB3Q12766 AC055764.2-201ENST00000610089 670 ntBASIC1.6□□□□□ -2.15
HMGXB3Q12766 AC091932.3-201ENST00000624223 323 ntBASIC1.6□□□□□ -2.15
HMGXB3Q12766 AC015726.3-201ENST00000624501 418 ntBASIC1.6□□□□□ -2.15
HMGXB3Q12766 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.6□□□□□ -2.15
HMGXB3Q12766 MIR924-201ENST00000638017 53 ntBASIC1.6□□□□□ -2.15
HMGXB3Q12766 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.6□□□□□ -2.15
HMGXB3Q12766 DEFB108F-201ENST00000344638 222 ntBASIC1.59□□□□□ -2.16
HMGXB3Q12766 AP002784.2-201ENST00000397300 549 ntBASIC1.59□□□□□ -2.16
HMGXB3Q12766 AL606495.1-201ENST00000422100 813 ntBASIC1.59□□□□□ -2.16
HMGXB3Q12766 OR51AB1P-201ENST00000429046 620 ntBASIC1.59□□□□□ -2.16
HMGXB3Q12766 AL627224.1-201ENST00000448334 444 ntBASIC1.59□□□□□ -2.16
HMGXB3Q12766 SNORD97-201ENST00000459187 142 ntBASIC1.59□□□□□ -2.16
HMGXB3Q12766 AC103833.1-201ENST00000517442 172 ntBASIC1.59□□□□□ -2.16
HMGXB3Q12766 DEFB108E-201ENST00000524692 240 ntBASIC1.59□□□□□ -2.16
HMGXB3Q12766 AP004371.1-201ENST00000525240 214 ntBASIC1.59□□□□□ -2.16
HMGXB3Q12766 CBX3P8-201ENST00000532412 525 ntBASIC1.59□□□□□ -2.16
HMGXB3Q12766 CBX3P7-201ENST00000532876 502 ntBASIC1.59□□□□□ -2.16
HMGXB3Q12766 AC105036.1-201ENST00000566222 271 ntBASIC1.59□□□□□ -2.16
HMGXB3Q12766 MIR4698-201ENST00000577795 80 ntBASIC1.59□□□□□ -2.16
HMGXB3Q12766 PCNAP1-202ENST00000595299 752 ntBASIC1.59□□□□□ -2.16
HMGXB3Q12766 AL162373.1-201ENST00000620433 407 ntBASIC1.59□□□□□ -2.16
HMGXB3Q12766 RNA5SP391-201ENST00000363456 119 ntBASIC1.58□□□□□ -2.16
HMGXB3Q12766 RNU6-666P-201ENST00000363499 107 ntBASIC1.58□□□□□ -2.16
HMGXB3Q12766 RNU6-629P-201ENST00000384061 103 ntBASIC1.58□□□□□ -2.16
HMGXB3Q12766 RNU1-78P-201ENST00000391248 165 ntBASIC1.58□□□□□ -2.16
HMGXB3Q12766 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.58□□□□□ -2.16
HMGXB3Q12766 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.58□□□□□ -2.16
HMGXB3Q12766 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HMGXB3Q12766 FCF1P2-201ENST00000415284 583 ntBASIC1.58□□□□□ -2.16
HMGXB3Q12766 RPL21P90-201ENST00000415692 466 ntBASIC1.58□□□□□ -2.16
HMGXB3Q12766 AC018630.2-202ENST00000422992 927 ntBASIC1.58□□□□□ -2.16
HMGXB3Q12766 RABEPKP1-201ENST00000440529 1026 ntBASIC1.58□□□□□ -2.16
HMGXB3Q12766 AL360221.1-201ENST00000445989 335 ntBASIC1.58□□□□□ -2.16
HMGXB3Q12766 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.58□□□□□ -2.16
HMGXB3Q12766 AL031183.1-201ENST00000457667 207 ntBASIC1.58□□□□□ -2.16
HMGXB3Q12766 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.58□□□□□ -2.16
HMGXB3Q12766 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.58□□□□□ -2.16
HMGXB3Q12766 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.58□□□□□ -2.16
HMGXB3Q12766 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.58□□□□□ -2.16
HMGXB3Q12766 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.58□□□□□ -2.16
HMGXB3Q12766 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HMGXB3Q12766 MIR6864-201ENST00000617935 70 ntBASIC1.58□□□□□ -2.16
HMGXB3Q12766 AC020923.1-201ENST00000624021 917 ntBASIC1.58□□□□□ -2.16
HMGXB3Q12766 ZNF519P1-201ENST00000449011 1626 ntBASIC1.57□□□□□ -2.16
HMGXB3Q12766 MIR330-201ENST00000362196 94 ntBASIC1.57□□□□□ -2.16
HMGXB3Q12766 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
HMGXB3Q12766 RPL31P35-201ENST00000431058 377 ntBASIC1.57□□□□□ -2.16
HMGXB3Q12766 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.57□□□□□ -2.16
HMGXB3Q12766 PSPHP1-201ENST00000450062 261 ntBASIC1.57□□□□□ -2.16
HMGXB3Q12766 RPS24P6-201ENST00000452670 400 ntBASIC1.57□□□□□ -2.16
HMGXB3Q12766 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.57□□□□□ -2.16
HMGXB3Q12766 AC005908.1-201ENST00000468701 347 ntBASIC1.57□□□□□ -2.16
HMGXB3Q12766 AC105914.1-201ENST00000511798 226 ntBASIC1.57□□□□□ -2.16
HMGXB3Q12766 CIR1P1-201ENST00000524055 1133 ntBASIC1.57□□□□□ -2.16
HMGXB3Q12766 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.57□□□□□ -2.16
HMGXB3Q12766 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HMGXB3Q12766 Y_RNA.303-201ENST00000364998 94 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.56□□□□□ -2.16
HMGXB3Q12766 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.56□□□□□ -2.16
HMGXB3Q12766 OR6K5P-201ENST00000447050 945 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 AC004022.1-201ENST00000447766 1066 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 AC107032.1-201ENST00000485945 480 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 RPS15AP34-201ENST00000487776 387 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 AC008676.3-201ENST00000521237 435 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.56□□□□□ -2.16
HMGXB3Q12766 AC115085.1-201ENST00000588924 229 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 AC008739.2-201ENST00000597006 317 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 AL138880.2-201ENST00000616214 239 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms