Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 DUTP6-201ENST00000425573 462 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.35□□□□□ -1.87
LTBQ06643 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.35□□□□□ -1.87
LTBQ06643 MTND3P16-201ENST00000452205 344 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AC108059.3-201ENST00000456388 214 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.35□□□□□ -1.87
LTBQ06643 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.35□□□□□ -1.87
LTBQ06643 HMGN1P13-201ENST00000505795 138 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AC103851.1-201ENST00000506833 274 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AC104619.4-201ENST00000510773 249 ntBASIC3.35□□□□□ -1.87
LTBQ06643 HIGD1AP3-201ENST00000515857 278 ntBASIC3.35□□□□□ -1.87
LTBQ06643 RNU6-277P-201ENST00000516272 106 ntBASIC3.35□□□□□ -1.87
LTBQ06643 HMGB1P41-201ENST00000520234 440 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.35□□□□□ -1.87
LTBQ06643 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.35□□□□□ -1.87
LTBQ06643 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.35□□□□□ -1.87
LTBQ06643 AC022690.1-201ENST00000526681 550 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AP005435.4-201ENST00000529514 284 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AP000857.1-201ENST00000532151 543 ntBASIC3.35□□□□□ -1.87
LTBQ06643 OR5B10P-201ENST00000532869 642 ntBASIC3.35□□□□□ -1.87
LTBQ06643 OR5BN1P-201ENST00000532955 829 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.35□□□□□ -1.87
LTBQ06643 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.35□□□□□ -1.87
LTBQ06643 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.35□□□□□ -1.87
LTBQ06643 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.35□□□□□ -1.87
LTBQ06643 AL133153.1-201ENST00000557756 303 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.35□□□□□ -1.87
LTBQ06643 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.35□□□□□ -1.87
LTBQ06643 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.35□□□□□ -1.87
LTBQ06643 AC243960.4-201ENST00000600532 288 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AC005034.5-201ENST00000604219 466 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AL034351.1-201ENST00000605288 668 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AC021646.1-201ENST00000605469 484 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AC116312.1-201ENST00000606841 314 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AC090574.1-201ENST00000623186 233 ntBASIC3.35□□□□□ -1.87
LTBQ06643 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LTBQ06643 PRO1804-201ENST00000623780 2050 ntBASIC3.35□□□□□ -1.87
LTBQ06643 MTND4P35-201ENST00000604257 1375 ntBASIC3.35□□□□□ -1.87
LTBQ06643 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LTBQ06643 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.35□□□□□ -1.87
LTBQ06643 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
LTBQ06643 AL365361.1-201ENST00000566942 3481 ntBASIC3.34□□□□□ -1.87
LTBQ06643 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LTBQ06643 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.34□□□□□ -1.87
LTBQ06643 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.34□□□□□ -1.87
LTBQ06643 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LTBQ06643 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LTBQ06643 RNU6-989P-201ENST00000362756 107 ntBASIC3.34□□□□□ -1.87
LTBQ06643 Y_RNA.419-201ENST00000384041 102 ntBASIC3.34□□□□□ -1.87
LTBQ06643 SNORD51-201ENST00000384320 80 ntBASIC3.34□□□□□ -1.87
LTBQ06643 MIR454-201ENST00000390180 115 ntBASIC3.34□□□□□ -1.87
LTBQ06643 U3.26-201ENST00000391236 204 ntBASIC3.34□□□□□ -1.87
LTBQ06643 MIR1250-201ENST00000408098 113 ntBASIC3.34□□□□□ -1.87
LTBQ06643 RN7SKP32-201ENST00000410167 303 ntBASIC3.34□□□□□ -1.87
LTBQ06643 OR1AA1P-201ENST00000419597 916 ntBASIC3.34□□□□□ -1.87
LTBQ06643 AL035423.1-201ENST00000420331 213 ntBASIC3.34□□□□□ -1.87
LTBQ06643 AL158156.1-201ENST00000422509 473 ntBASIC3.34□□□□□ -1.87
LTBQ06643 USP9YP7-201ENST00000436723 430 ntBASIC3.34□□□□□ -1.87
LTBQ06643 USP9YP32-201ENST00000452432 430 ntBASIC3.34□□□□□ -1.87
LTBQ06643 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.34□□□□□ -1.87
LTBQ06643 RPS29P15-201ENST00000458329 171 ntBASIC3.34□□□□□ -1.87
LTBQ06643 HMGN2P26-201ENST00000463169 339 ntBASIC3.34□□□□□ -1.87
LTBQ06643 AC126389.1-201ENST00000477436 290 ntBASIC3.34□□□□□ -1.87
LTBQ06643 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LTBQ06643 AC092436.1-201ENST00000506450 503 ntBASIC3.34□□□□□ -1.87
LTBQ06643 AC105417.1-201ENST00000514691 285 ntBASIC3.34□□□□□ -1.87
LTBQ06643 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.34□□□□□ -1.87
LTBQ06643 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.34□□□□□ -1.87
LTBQ06643 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.34□□□□□ -1.87
LTBQ06643 SETP7-201ENST00000552169 453 ntBASIC3.34□□□□□ -1.87
LTBQ06643 AC011611.1-201ENST00000552179 197 ntBASIC3.34□□□□□ -1.87
LTBQ06643 SCOCP1-201ENST00000554676 349 ntBASIC3.34□□□□□ -1.87
LTBQ06643 AL355375.2-201ENST00000574825 175 ntBASIC3.34□□□□□ -1.87
LTBQ06643 AC087499.8-201ENST00000578406 226 ntBASIC3.34□□□□□ -1.87
LTBQ06643 MIR4775-201ENST00000581168 75 ntBASIC3.34□□□□□ -1.87
LTBQ06643 MIR3922-201ENST00000585192 84 ntBASIC3.34□□□□□ -1.87
LTBQ06643 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.34□□□□□ -1.87
LTBQ06643 AC010591.1-201ENST00000603941 649 ntBASIC3.34□□□□□ -1.87
LTBQ06643 RNU6-89P-201ENST00000606519 100 ntBASIC3.34□□□□□ -1.87
LTBQ06643 AC004908.2-201ENST00000609090 574 ntBASIC3.34□□□□□ -1.87
LTBQ06643 AC006329.2-201ENST00000611491 394 ntBASIC3.34□□□□□ -1.87
LTBQ06643 C2orf27A-204ENST00000623058 969 ntBASIC3.34□□□□□ -1.87
LTBQ06643 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.34□□□□□ -1.87
LTBQ06643 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.34□□□□□ -1.87
LTBQ06643 TPTEP1-208ENST00000636884 213 ntBASIC3.34□□□□□ -1.87
LTBQ06643 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.34□□□□□ -1.87
LTBQ06643 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.34□□□□□ -1.87
LTBQ06643 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LTBQ06643 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.34□□□□□ -1.87
LTBQ06643 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
LTBQ06643 AC073073.2-201ENST00000609827 2578 ntBASIC3.34□□□□□ -1.88
LTBQ06643 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.34□□□□□ -1.88
LTBQ06643 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
LTBQ06643 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
LTBQ06643 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LTBQ06643 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.33□□□□□ -1.88
LTBQ06643 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LTBQ06643 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
LTBQ06643 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
LTBQ06643 AL353746.1-201ENST00000566293 6881 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms