Protein–RNA interactions for Protein: Q01064

PDE1B, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B, humanhuman

Predictions only

Length 536 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1BQ01064 HMGN2P20-201ENST00000437531 273 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 AC093156.1-201ENST00000440382 670 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 AC005094.1-201ENST00000440420 368 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 SSXP5-201ENST00000443473 287 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 GAPDHP27-201ENST00000447427 1020 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 AL136380.1-201ENST00000447970 162 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 AC108059.3-201ENST00000456388 214 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDE1BQ01064 HSPD1P15-201ENST00000505573 1122 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 AF213884.2-201ENST00000510417 903 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 AL117351.2-201ENST00000513571 157 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 RNU1-143P-201ENST00000516296 146 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 SNORA74D-201ENST00000516404 141 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 SCARNA20.6-201ENST00000517251 106 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.32□□□□□ -1.88
PDE1BQ01064 AC090572.1-201ENST00000519251 160 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.32□□□□□ -1.88
PDE1BQ01064 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.32□□□□□ -1.88
PDE1BQ01064 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.32□□□□□ -1.88
PDE1BQ01064 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDE1BQ01064 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.32□□□□□ -1.88
PDE1BQ01064 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.32□□□□□ -1.88
PDE1BQ01064 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.32□□□□□ -1.88
PDE1BQ01064 U1.23-201ENST00000610293 146 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 AC092794.1-201ENST00000612734 582 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 TUG1_2.1-201ENST00000614234 87 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 RNU1-68P-201ENST00000615382 146 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 AL603758.1-201ENST00000618654 241 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 U1.39-201ENST00000621562 146 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 MIR6863-201ENST00000636112 90 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PDE1BQ01064 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.32□□□□□ -1.88
PDE1BQ01064 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PDE1BQ01064 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDE1BQ01064 AC002546.1-201ENST00000588041 2504 ntBASIC3.32□□□□□ -1.88
PDE1BQ01064 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.32□□□□□ -1.88
PDE1BQ01064 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.31□□□□□ -1.88
PDE1BQ01064 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
PDE1BQ01064 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDE1BQ01064 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PDE1BQ01064 AC009812.4-201ENST00000569134 1805 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 TAB3P1-202ENST00000452645 1634 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PDE1BQ01064 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDE1BQ01064 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.31□□□□□ -1.88
PDE1BQ01064 RNU6-511P-201ENST00000363496 107 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDE1BQ01064 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDE1BQ01064 CALM2P3-201ENST00000400429 449 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 MIR887-201ENST00000401258 79 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 RNU4-65P-201ENST00000410473 140 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 RPL32P35-201ENST00000415214 394 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 ELOCP4-201ENST00000420090 333 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.31□□□□□ -1.88
PDE1BQ01064 FCF1P1-201ENST00000432690 571 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.31□□□□□ -1.88
PDE1BQ01064 RPL26P6-201ENST00000440913 438 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 AL162389.1-201ENST00000449233 177 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 AC115115.1-201ENST00000449927 248 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 HMGB1P29-201ENST00000505659 499 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 AC110794.1-201ENST00000505816 425 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 KLHL2P1-201ENST00000508691 521 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.31□□□□□ -1.88
PDE1BQ01064 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.31□□□□□ -1.88
PDE1BQ01064 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.31□□□□□ -1.88
PDE1BQ01064 RNA5SP217-201ENST00000515959 91 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 MTND4LP26-201ENST00000518144 282 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 OR5G4P-201ENST00000525251 760 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PDE1BQ01064 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.31□□□□□ -1.88
PDE1BQ01064 AC007536.1-201ENST00000533382 349 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 AC123904.3-201ENST00000547218 814 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.31□□□□□ -1.88
PDE1BQ01064 AC027807.1-201ENST00000559921 996 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.31□□□□□ -1.88
PDE1BQ01064 AL391646.1-201ENST00000603860 190 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 AC126118.1-201ENST00000607744 628 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 AL390240.1-201ENST00000612950 384 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 AL442067.2-201ENST00000614033 363 ntBASIC3.31□□□□□ -1.88
PDE1BQ01064 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PDE1BQ01064 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.31□□□□□ -1.88
PDE1BQ01064 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PDE1BQ01064 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
PDE1BQ01064 API5P2-201ENST00000397055 1498 ntBASIC3.3□□□□□ -1.88
PDE1BQ01064 RNU6-50P-201ENST00000362356 103 ntBASIC3.3□□□□□ -1.88
PDE1BQ01064 Y_RNA.159-201ENST00000363674 87 ntBASIC3.3□□□□□ -1.88
PDE1BQ01064 SNORA51.4-201ENST00000364993 124 ntBASIC3.3□□□□□ -1.88
PDE1BQ01064 RNU6-39P-201ENST00000384344 107 ntBASIC3.3□□□□□ -1.88
PDE1BQ01064 AL109755.1-201ENST00000401791 649 ntBASIC3.3□□□□□ -1.88
PDE1BQ01064 RPL5P18-201ENST00000406671 891 ntBASIC3.3□□□□□ -1.88
PDE1BQ01064 RNU2-62P-201ENST00000410868 191 ntBASIC3.3□□□□□ -1.88
PDE1BQ01064 RNA5SP120-201ENST00000410900 112 ntBASIC3.3□□□□□ -1.88
PDE1BQ01064 RNA5SP344-201ENST00000411081 104 ntBASIC3.3□□□□□ -1.88
PDE1BQ01064 DUTP6-201ENST00000425573 462 ntBASIC3.3□□□□□ -1.88
PDE1BQ01064 MTCO3P30-201ENST00000426425 670 ntBASIC3.3□□□□□ -1.88
PDE1BQ01064 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.3□□□□□ -1.88
PDE1BQ01064 MTATP6P4-201ENST00000427725 675 ntBASIC3.3□□□□□ -1.88
PDE1BQ01064 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.3□□□□□ -1.88
PDE1BQ01064 AC016696.1-201ENST00000446949 318 ntBASIC3.3□□□□□ -1.88
PDE1BQ01064 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms