Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AP001960.1-201ENST00000506494 658 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 MRPS33P3-201ENST00000513456 322 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 OSBPL9P3-201ENST00000534523 595 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 AC005332.10-201ENST00000612725 619 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
HSPG2P98160 AL591034.1-201ENST00000407447 340 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 AC013268.2-201ENST00000420753 337 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 HMGN2P30-201ENST00000423237 256 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 AC010683.1-201ENST00000473673 378 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 RPL21P103-201ENST00000479921 488 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.56□□□□□ -2.32
HSPG2P98160 AC104685.1-201ENST00000502445 371 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.56□□□□□ -2.32
HSPG2P98160 MIR4698-201ENST00000577795 80 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.56□□□□□ -2.32
HSPG2P98160 AC009220.3-201ENST00000604318 586 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.56□□□□□ -2.32
HSPG2P98160 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.56□□□□□ -2.32
HSPG2P98160 RN7SKP34-201ENST00000516142 244 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.56□□□□□ -2.32
HSPG2P98160 CYCSP26-201ENST00000534107 320 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 MTCO3P24-201ENST00000572729 782 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 AC108706.1-201ENST00000611053 297 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 AC091304.6-201ENST00000619761 202 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 RNU6-1263P-201ENST00000384601 106 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 SNORD23.1-201ENST00000408212 104 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 RNU4-72P-201ENST00000410754 173 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.55□□□□□ -2.32
HSPG2P98160 AC118469.1-201ENST00000442943 488 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 AC146507.1-201ENST00000468335 354 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.55□□□□□ -2.32
HSPG2P98160 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC0.55□□□□□ -2.32
HSPG2P98160 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.55□□□□□ -2.32
HSPG2P98160 AC021646.1-201ENST00000605469 484 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 MIR6835-201ENST00000621552 64 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.55□□□□□ -2.32
HSPG2P98160 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.55□□□□□ -2.32
HSPG2P98160 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
HSPG2P98160 RNU2-41P-201ENST00000410991 178 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.55□□□□□ -2.32
HSPG2P98160 RPL27AP8-201ENST00000424277 446 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 AC069277.2-201ENST00000454211 432 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.55□□□□□ -2.32
HSPG2P98160 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.55□□□□□ -2.32
HSPG2P98160 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.55□□□□□ -2.32
HSPG2P98160 SNORD39.2-201ENST00000579995 76 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 MIR3690-201ENST00000580266 75 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.55□□□□□ -2.32
HSPG2P98160 AC004908.2-201ENST00000609090 574 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
HSPG2P98160 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
HSPG2P98160 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.55□□□□□ -2.32
HSPG2P98160 AL627224.1-201ENST00000448334 444 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 PSPHP1-201ENST00000450062 261 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.55□□□□□ -2.32
HSPG2P98160 SUMO2P2-201ENST00000456482 255 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 AC005410.1-202ENST00000460347 485 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 AC074029.2-201ENST00000551045 634 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 AL138976.2-201ENST00000563989 694 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 AC020658.4-201ENST00000613987 684 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 SDR42E1P2-201ENST00000614861 481 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 SDR42E1P4-201ENST00000620894 481 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 CCT4P2-201ENST00000233836 1548 ntBASIC0.55□□□□□ -2.32
HSPG2P98160 SNORA7.2-201ENST00000364446 145 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
HSPG2P98160 AC016691.1-201ENST00000441321 413 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 UBBP3-201ENST00000445497 241 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 RNU1-61P-201ENST00000516107 151 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 SNORA31.20-201ENST00000517111 133 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 AP003484.1-201ENST00000530974 250 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.54□□□□□ -2.32
HSPG2P98160 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.54□□□□□ -2.32
HSPG2P98160 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.54□□□□□ -2.32
HSPG2P98160 SNORA38-201ENST00000363946 132 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.54□□□□□ -2.32
HSPG2P98160 USP12PX-201ENST00000432383 1057 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 OR5H4P-201ENST00000510851 923 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 RNA5SP468-201ENST00000516782 93 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 AC090616.5-202ENST00000582111 297 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 NACAP2-201ENST00000318548 624 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 RNA5SP276-201ENST00000362580 94 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 RNY4P3-201ENST00000365254 95 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 SNORA46.1-201ENST00000391069 153 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 LINC01347-201ENST00000417964 355 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 GTF2IP12-201ENST00000456547 356 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 RNA5SP310-201ENST00000459084 116 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 AC026801.1-201ENST00000497178 464 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 AC091965.2-201ENST00000512324 613 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 NDUFS5P6-201ENST00000529136 295 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 OR5B19P-201ENST00000531766 928 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.54□□□□□ -2.32
HSPG2P98160 HAUS6P2-201ENST00000433254 2404 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 AL356057.2-201ENST00000403318 432 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.54□□□□□ -2.32
HSPG2P98160 OR6C73P-201ENST00000546432 358 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 AC107214.2-201ENST00000608204 634 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 MIR6857-201ENST00000613267 93 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 AC110491.1-201ENST00000562191 2010 ntBASIC0.54□□□□□ -2.32
HSPG2P98160 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms