Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 DNAJC8P1-201ENST00000554535 372 ntBASIC3.27□□□□□ -1.89
RPS3AP61247 AC098848.2-201ENST00000588023 330 ntBASIC3.27□□□□□ -1.89
RPS3AP61247 AC087683.1-201ENST00000591187 441 ntBASIC3.27□□□□□ -1.89
RPS3AP61247 BNIP3P9-201ENST00000603714 553 ntBASIC3.27□□□□□ -1.89
RPS3AP61247 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.27□□□□□ -1.89
RPS3AP61247 AP003355.3-201ENST00000623465 114 ntBASIC3.27□□□□□ -1.89
RPS3AP61247 AC110774.1-201ENST00000623567 2018 ntBASIC3.27□□□□□ -1.89
RPS3AP61247 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.27□□□□□ -1.89
RPS3AP61247 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPS3AP61247 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPS3AP61247 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPS3AP61247 RNU6-799P-201ENST00000363567 107 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 Y_RNA.194-201ENST00000363985 102 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 RNU6-1042P-201ENST00000384204 107 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RPS3AP61247 RNU2-68P-201ENST00000410878 191 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.26□□□□□ -1.89
RPS3AP61247 RPS29P4-201ENST00000414733 161 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.26□□□□□ -1.89
RPS3AP61247 AL109913.1-201ENST00000421173 514 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.26□□□□□ -1.89
RPS3AP61247 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.26□□□□□ -1.89
RPS3AP61247 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.26□□□□□ -1.89
RPS3AP61247 RPL23AP30-201ENST00000432419 501 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 AL591212.2-201ENST00000433923 257 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 RPS20P5-201ENST00000434808 360 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.26□□□□□ -1.89
RPS3AP61247 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.26□□□□□ -1.89
RPS3AP61247 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.26□□□□□ -1.89
RPS3AP61247 C1DP4-201ENST00000455429 424 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 HMGN1P18-201ENST00000457642 277 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 TPT1P7-201ENST00000458300 517 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 RNU7-23P-201ENST00000459465 62 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 AC106707.2-201ENST00000484182 374 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 AC105252.1-201ENST00000503089 286 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 MTCO3P7-201ENST00000510008 774 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 RNA5SP165-201ENST00000517142 115 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 AC007991.1-201ENST00000522680 631 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 OR5B19P-201ENST00000531766 928 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.26□□□□□ -1.89
RPS3AP61247 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.26□□□□□ -1.89
RPS3AP61247 MIR4429-201ENST00000580105 73 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 MIR4506-201ENST00000584693 77 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 NUTF2P8-201ENST00000604593 363 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 U3.45-201ENST00000607547 219 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 AC022893.3-201ENST00000607665 437 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
RPS3AP61247 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPS3AP61247 AC011939.3-201ENST00000613686 466 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 AC004852.3-201ENST00000614131 326 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 AC099506.2-201ENST00000623074 221 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 AL732372.2-225ENST00000642124 456 ntBASIC3.26□□□□□ -1.89
RPS3AP61247 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPS3AP61247 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
RPS3AP61247 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPS3AP61247 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPS3AP61247 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPS3AP61247 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPS3AP61247 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPS3AP61247 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RPS3AP61247 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPS3AP61247 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RPS3AP61247 RNU6-181P-201ENST00000363225 107 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 MIR670-201ENST00000390142 98 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 Y_RNA.582-201ENST00000391023 95 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 RN7SKP123-201ENST00000410732 291 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.25□□□□□ -1.89
RPS3AP61247 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.25□□□□□ -1.89
RPS3AP61247 AC093578.1-201ENST00000415219 368 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.25□□□□□ -1.89
RPS3AP61247 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.25□□□□□ -1.89
RPS3AP61247 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.25□□□□□ -1.89
RPS3AP61247 RPL36AP53-201ENST00000432891 316 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.25□□□□□ -1.89
RPS3AP61247 MTCYBP1-201ENST00000454315 1119 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.25□□□□□ -1.89
RPS3AP61247 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
RPS3AP61247 RNU6-405P-201ENST00000516637 110 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 MIR2276-201ENST00000516886 89 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 RNU6-445P-201ENST00000516949 107 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.25□□□□□ -1.89
RPS3AP61247 AP006245.1-201ENST00000522549 120 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.25□□□□□ -1.89
RPS3AP61247 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.25□□□□□ -1.89
RPS3AP61247 AL391261.3-201ENST00000557194 520 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.25□□□□□ -1.89
RPS3AP61247 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.25□□□□□ -1.89
RPS3AP61247 MIR92B-201ENST00000607575 96 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 DUSP12P1-201ENST00000612874 516 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 MIR6075-201ENST00000620782 95 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
RPS3AP61247 MTND5P7-201ENST00000413558 1798 ntBASIC3.25□□□□□ -1.89
RPS3AP61247 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.25□□□□□ -1.89
RPS3AP61247 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
RPS3AP61247 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.24□□□□□ -1.89
RPS3AP61247 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
RPS3AP61247 AC091564.4-201ENST00000533934 2194 ntBASIC3.24□□□□□ -1.89
RPS3AP61247 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms