Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SNORA67.3-201ENST00000384366 140 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 AL023284.1-201ENST00000403956 276 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 AL139098.1-201ENST00000407291 389 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 EIF4EP2-201ENST00000422816 654 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.22□□□□□ -2.21
CKS1BP61024 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.22□□□□□ -2.21
CKS1BP61024 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.22□□□□□ -2.21
CKS1BP61024 AC092393.1-201ENST00000439625 742 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 RPS26P30-201ENST00000443431 335 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 HMGN1P5-201ENST00000448591 263 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 MTND2P24-201ENST00000453434 806 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 RPL9P6-201ENST00000492764 598 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.22□□□□□ -2.21
CKS1BP61024 MTCO1P31-201ENST00000506355 492 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.22□□□□□ -2.21
CKS1BP61024 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.22□□□□□ -2.21
CKS1BP61024 DUXAP5-201ENST00000529668 529 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.22□□□□□ -2.21
CKS1BP61024 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.22□□□□□ -2.21
CKS1BP61024 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.22□□□□□ -2.21
CKS1BP61024 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
CKS1BP61024 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.22□□□□□ -2.21
CKS1BP61024 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.22□□□□□ -2.21
CKS1BP61024 AC110491.1-201ENST00000562191 2010 ntBASIC1.22□□□□□ -2.21
CKS1BP61024 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CKS1BP61024 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CKS1BP61024 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 POLHP1-201ENST00000411806 470 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 USP9YP6-201ENST00000413550 854 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.21□□□□□ -2.22
CKS1BP61024 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CKS1BP61024 ZYG11AP1-201ENST00000430329 837 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.21□□□□□ -2.22
CKS1BP61024 RSU1P2-202ENST00000437884 485 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.21□□□□□ -2.22
CKS1BP61024 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.21□□□□□ -2.22
CKS1BP61024 TRBV1-201ENST00000476502 284 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 RPL38P4-201ENST00000502376 214 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.21□□□□□ -2.22
CKS1BP61024 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.21□□□□□ -2.22
CKS1BP61024 AC107393.1-201ENST00000512403 346 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 AC017037.2-201ENST00000513850 890 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 HSPE1P18-201ENST00000517602 280 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 AC027309.2-201ENST00000520566 192 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.21□□□□□ -2.22
CKS1BP61024 EEF1A1P37-201ENST00000522748 715 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.21□□□□□ -2.22
CKS1BP61024 IMMP1LP2-201ENST00000552954 492 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.21□□□□□ -2.22
CKS1BP61024 AC008269.2-201ENST00000561915 1105 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 GAS5-AS1-201ENST00000602767 694 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 SNRPGP19-201ENST00000603826 189 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 PRR13P7-201ENST00000605538 430 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.21□□□□□ -2.22
CKS1BP61024 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CKS1BP61024 MTCO1P18-201ENST00000455518 1419 ntBASIC1.21□□□□□ -2.22
CKS1BP61024 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.21□□□□□ -2.22
CKS1BP61024 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CKS1BP61024 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.21□□□□□ -2.22
CKS1BP61024 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
CKS1BP61024 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CKS1BP61024 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CKS1BP61024 RNU6-77P-201ENST00000410554 91 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 RNA5SP508-201ENST00000411327 119 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 UBE2FP1-201ENST00000416536 447 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 AC074117.2-201ENST00000417130 397 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 RPL31P54-201ENST00000429803 370 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.2□□□□□ -2.22
CKS1BP61024 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CKS1BP61024 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.2□□□□□ -2.22
CKS1BP61024 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.2□□□□□ -2.22
CKS1BP61024 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.2□□□□□ -2.22
CKS1BP61024 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
CKS1BP61024 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
CKS1BP61024 AC017007.3-201ENST00000479865 435 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 SNORA4.4-201ENST00000515921 135 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 RNU6-362P-201ENST00000516736 90 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 RNA5SP165-201ENST00000517142 115 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.2□□□□□ -2.22
CKS1BP61024 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.2□□□□□ -2.22
CKS1BP61024 AC087276.1-201ENST00000529659 480 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 RANP3-201ENST00000530970 276 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 ARL2BPP2-201ENST00000550907 489 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 ATP5F1P7-201ENST00000567330 760 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 AC024619.4-201ENST00000580924 316 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 MIR4435-1-201ENST00000582552 80 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.2□□□□□ -2.22
CKS1BP61024 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.2□□□□□ -2.22
CKS1BP61024 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.2□□□□□ -2.22
CKS1BP61024 AL136981.2-201ENST00000617319 734 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 AC012150.2-201ENST00000621300 544 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 LINC00216-201ENST00000623548 1126 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 AC110994.2-201ENST00000635481 492 ntBASIC1.2□□□□□ -2.22
CKS1BP61024 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CKS1BP61024 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CKS1BP61024 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CKS1BP61024 RNU6-878P-201ENST00000384578 110 ntBASIC1.19□□□□□ -2.22
CKS1BP61024 RNU6-253P-201ENST00000384730 105 ntBASIC1.19□□□□□ -2.22
CKS1BP61024 MIR30A-201ENST00000385092 71 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms