Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CLDN18P56856 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CLDN18P56856 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN18P56856 AC092447.10-201ENST00000620607 1652 ntBASIC2.15□□□□□ -2.06
CLDN18P56856 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLDN18P56856 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLDN18P56856 SNORA80E-201ENST00000384744 137 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 RNA5SP508-201ENST00000411327 119 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 CYCSP48-201ENST00000417124 323 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 EIF4EP4-201ENST00000424916 578 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.15□□□□□ -2.07
CLDN18P56856 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.15□□□□□ -2.07
CLDN18P56856 COX7BP2-201ENST00000437976 242 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.15□□□□□ -2.07
CLDN18P56856 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.15□□□□□ -2.07
CLDN18P56856 RPS27AP10-201ENST00000496103 208 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.15□□□□□ -2.07
CLDN18P56856 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.15□□□□□ -2.07
CLDN18P56856 AC026436.1-201ENST00000510537 270 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN18P56856 AC008413.1-201ENST00000511864 177 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 AC008837.2-201ENST00000513076 418 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 AC110760.3-202ENST00000515177 371 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN18P56856 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.15□□□□□ -2.07
CLDN18P56856 AC010186.2-204ENST00000537668 439 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 AC121758.2-201ENST00000553271 193 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN18P56856 CYCSP2-201ENST00000558168 301 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN18P56856 RPS3AP23-202ENST00000574601 686 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.15□□□□□ -2.07
CLDN18P56856 BNIP3P26-201ENST00000600827 554 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 AL160237.3-201ENST00000604114 1013 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 AC046143.2-201ENST00000609789 160 ntBASIC2.15□□□□□ -2.07
CLDN18P56856 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CLDN18P56856 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLDN18P56856 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLDN18P56856 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLDN18P56856 ZNF658B-202ENST00000615961 3375 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CLDN18P56856 RNU4-51P-201ENST00000364206 140 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CLDN18P56856 RNA5SP181-201ENST00000410246 98 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 RNU4-72P-201ENST00000410754 173 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN18P56856 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN18P56856 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.14□□□□□ -2.07
CLDN18P56856 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 AC098826.1-201ENST00000433943 471 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 RPS12P2-201ENST00000439728 269 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 CECR9-201ENST00000453421 199 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 MRPL42P6-201ENST00000486397 371 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 HMGB1P36-201ENST00000487709 576 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.14□□□□□ -2.07
CLDN18P56856 RNA5SP24-201ENST00000516478 95 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN18P56856 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN18P56856 OR5BN1P-201ENST00000532955 829 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.14□□□□□ -2.07
CLDN18P56856 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLDN18P56856 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN18P56856 AP002770.2-201ENST00000543613 532 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 AC091544.4-201ENST00000555268 342 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 AC027807.1-201ENST00000559921 996 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 SNORD53-201ENST00000579969 78 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 AC061975.8-201ENST00000587058 721 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 AC007938.3-201ENST00000604965 623 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 AC024060.1-201ENST00000607052 494 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 AC007349.4-201ENST00000608114 532 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 AC005858.4-201ENST00000623191 700 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN18P56856 MIR7157-201ENST00000635801 60 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN18P56856 ADAM3A-203ENST00000461344 2157 ntBASIC2.14□□□□□ -2.07
CLDN18P56856 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLDN18P56856 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
CLDN18P56856 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN18P56856 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.13□□□□□ -2.07
CLDN18P56856 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.13□□□□□ -2.07
CLDN18P56856 AC007336.1-201ENST00000576365 3828 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 MTND5P29-201ENST00000458676 1807 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 MIR1284-201ENST00000408337 120 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 RNU4-53P-201ENST00000410828 140 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN18P56856 AL449283.1-202ENST00000418249 604 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN18P56856 AC098831.1-201ENST00000440661 216 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 MTCO3P45-201ENST00000443036 613 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 IFNA11P-201ENST00000446352 526 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 MTATP6P7-201ENST00000453315 681 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLDN18P56856 AC008481.1-201ENST00000463278 396 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 SCARNA3-201ENST00000517097 143 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 AP005902.1-201ENST00000521358 186 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.13□□□□□ -2.07
CLDN18P56856 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN18P56856 AC118942.1-201ENST00000529674 1035 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 MTCO2P15-201ENST00000532655 656 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms