Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNU6-1078P-201ENST00000364522 103 ntBASIC2.88□□□□□ -1.95
VCPP55072 Y_RNA.302-201ENST00000364997 102 ntBASIC2.88□□□□□ -1.95
VCPP55072 AL138827.1-201ENST00000402666 306 ntBASIC2.88□□□□□ -1.95
VCPP55072 RPS4XP7-201ENST00000406274 780 ntBASIC2.88□□□□□ -1.95
VCPP55072 MIR1305-201ENST00000408300 86 ntBASIC2.88□□□□□ -1.95
VCPP55072 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VCPP55072 RNU2-25P-201ENST00000411041 191 ntBASIC2.88□□□□□ -1.95
VCPP55072 Z98742.3-201ENST00000418637 326 ntBASIC2.88□□□□□ -1.95
VCPP55072 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.88□□□□□ -1.95
VCPP55072 AC005005.2-201ENST00000420779 380 ntBASIC2.88□□□□□ -1.95
VCPP55072 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.88□□□□□ -1.95
VCPP55072 AC090774.1-201ENST00000435925 246 ntBASIC2.88□□□□□ -1.95
VCPP55072 UBE2FP3-201ENST00000436366 524 ntBASIC2.88□□□□□ -1.95
VCPP55072 ARPC3P1-201ENST00000437218 533 ntBASIC2.88□□□□□ -1.95
VCPP55072 RSU1P2-202ENST00000437884 485 ntBASIC2.88□□□□□ -1.95
VCPP55072 OR6C5P-201ENST00000452388 923 ntBASIC2.88□□□□□ -1.95
VCPP55072 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.88□□□□□ -1.95
VCPP55072 AC004263.1-201ENST00000479327 332 ntBASIC2.88□□□□□ -1.95
VCPP55072 AC034222.1-201ENST00000494052 532 ntBASIC2.88□□□□□ -1.95
VCPP55072 AC106872.3-201ENST00000495104 446 ntBASIC2.88□□□□□ -1.95
VCPP55072 AIG1P1-201ENST00000503376 148 ntBASIC2.88□□□□□ -1.95
VCPP55072 AC022447.3-201ENST00000506865 495 ntBASIC2.88□□□□□ -1.95
VCPP55072 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.88□□□□□ -1.95
VCPP55072 RNU6-928P-201ENST00000516876 104 ntBASIC2.88□□□□□ -1.95
VCPP55072 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.88□□□□□ -1.95
VCPP55072 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.88□□□□□ -1.95
VCPP55072 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.88□□□□□ -1.95
VCPP55072 HMGB1P14-201ENST00000557424 591 ntBASIC2.88□□□□□ -1.95
VCPP55072 AC090888.1-201ENST00000561335 1141 ntBASIC2.88□□□□□ -1.95
VCPP55072 ZNF861P-201ENST00000588126 639 ntBASIC2.88□□□□□ -1.95
VCPP55072 CR381653.2-201ENST00000624041 768 ntBASIC2.88□□□□□ -1.95
VCPP55072 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.88□□□□□ -1.95
VCPP55072 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VCPP55072 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.88□□□□□ -1.95
VCPP55072 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VCPP55072 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.87□□□□□ -1.95
VCPP55072 RNU6-114P-201ENST00000384704 105 ntBASIC2.87□□□□□ -1.95
VCPP55072 MIR9-1-201ENST00000385198 89 ntBASIC2.87□□□□□ -1.95
VCPP55072 AL512633.1-201ENST00000399931 655 ntBASIC2.87□□□□□ -1.95
VCPP55072 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.87□□□□□ -1.95
VCPP55072 RN7SKP192-201ENST00000411291 327 ntBASIC2.87□□□□□ -1.95
VCPP55072 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.87□□□□□ -1.95
VCPP55072 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.87□□□□□ -1.95
VCPP55072 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.87□□□□□ -1.95
VCPP55072 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.87□□□□□ -1.95
VCPP55072 AC011233.1-201ENST00000422812 283 ntBASIC2.87□□□□□ -1.95
VCPP55072 AL445669.1-201ENST00000426743 755 ntBASIC2.87□□□□□ -1.95
VCPP55072 RPL7L1P10-201ENST00000427790 463 ntBASIC2.87□□□□□ -1.95
VCPP55072 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.87□□□□□ -1.95
VCPP55072 AC129850.1-201ENST00000436203 508 ntBASIC2.87□□□□□ -1.95
VCPP55072 UBE2V1P13-201ENST00000436983 439 ntBASIC2.87□□□□□ -1.95
VCPP55072 MTND5P2-201ENST00000442927 1142 ntBASIC2.87□□□□□ -1.95
VCPP55072 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.87□□□□□ -1.95
VCPP55072 MRPL50P4-201ENST00000446432 475 ntBASIC2.87□□□□□ -1.95
VCPP55072 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.87□□□□□ -1.95
VCPP55072 MTND1P9-201ENST00000453775 944 ntBASIC2.87□□□□□ -1.95
VCPP55072 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.87□□□□□ -1.95
VCPP55072 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.87□□□□□ -1.95
VCPP55072 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.87□□□□□ -1.95
VCPP55072 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VCPP55072 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.87□□□□□ -1.95
VCPP55072 RNU6-1129P-201ENST00000515964 104 ntBASIC2.87□□□□□ -1.95
VCPP55072 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.87□□□□□ -1.95
VCPP55072 AC068587.4-201ENST00000533893 186 ntBASIC2.87□□□□□ -1.95
VCPP55072 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.87□□□□□ -1.95
VCPP55072 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.87□□□□□ -1.95
VCPP55072 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.87□□□□□ -1.95
VCPP55072 AC008751.2-201ENST00000597885 980 ntBASIC2.87□□□□□ -1.95
VCPP55072 BNIP3P23-201ENST00000599655 511 ntBASIC2.87□□□□□ -1.95
VCPP55072 Z99289.3-201ENST00000605586 594 ntBASIC2.87□□□□□ -1.95
VCPP55072 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.87□□□□□ -1.95
VCPP55072 AL161734.1-201ENST00000609720 557 ntBASIC2.87□□□□□ -1.95
VCPP55072 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.87□□□□□ -1.95
VCPP55072 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.87□□□□□ -1.95
VCPP55072 PCMTD1P7-201ENST00000634506 357 ntBASIC2.87□□□□□ -1.95
VCPP55072 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.87□□□□□ -1.95
VCPP55072 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.87□□□□□ -1.95
VCPP55072 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
VCPP55072 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.87□□□□□ -1.95
VCPP55072 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.87□□□□□ -1.95
VCPP55072 ZNF519P1-201ENST00000449011 1626 ntBASIC2.86□□□□□ -1.95
VCPP55072 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
VCPP55072 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VCPP55072 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VCPP55072 MIR592-201ENST00000384959 97 ntBASIC2.86□□□□□ -1.95
VCPP55072 RNA5SP354-201ENST00000391247 136 ntBASIC2.86□□□□□ -1.95
VCPP55072 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.86□□□□□ -1.95
VCPP55072 HMGB1P11-201ENST00000413899 637 ntBASIC2.86□□□□□ -1.95
VCPP55072 AL593851.1-201ENST00000426171 157 ntBASIC2.86□□□□□ -1.95
VCPP55072 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.86□□□□□ -1.95
VCPP55072 AC009296.1-201ENST00000443146 155 ntBASIC2.86□□□□□ -1.95
VCPP55072 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.86□□□□□ -1.95
VCPP55072 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.86□□□□□ -1.95
VCPP55072 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.86□□□□□ -1.95
VCPP55072 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.86□□□□□ -1.95
VCPP55072 AC072039.1-201ENST00000477611 581 ntBASIC2.86□□□□□ -1.95
VCPP55072 RPS27P26-201ENST00000494583 239 ntBASIC2.86□□□□□ -1.95
VCPP55072 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.86□□□□□ -1.95
VCPP55072 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.86□□□□□ -1.95
VCPP55072 RNU6-678P-201ENST00000516832 109 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms