Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC092001.1-201ENST00000453012 261 ntBASIC3.78□□□□□ -1.8
COPB1P53618 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.78□□□□□ -1.8
COPB1P53618 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.78□□□□□ -1.8
COPB1P53618 AMD1P1-201ENST00000457220 922 ntBASIC3.78□□□□□ -1.8
COPB1P53618 RPL23AP14-201ENST00000468281 468 ntBASIC3.78□□□□□ -1.8
COPB1P53618 RN7SL442P-201ENST00000473804 320 ntBASIC3.78□□□□□ -1.8
COPB1P53618 AC078785.3-201ENST00000476607 425 ntBASIC3.78□□□□□ -1.8
COPB1P53618 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COPB1P53618 AP001086.1-201ENST00000494882 321 ntBASIC3.78□□□□□ -1.8
COPB1P53618 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.78□□□□□ -1.8
COPB1P53618 HMGN1P11-201ENST00000508668 303 ntBASIC3.78□□□□□ -1.8
COPB1P53618 RNU7-51P-201ENST00000516560 62 ntBASIC3.78□□□□□ -1.8
COPB1P53618 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.78□□□□□ -1.8
COPB1P53618 AC107934.2-201ENST00000518653 310 ntBASIC3.78□□□□□ -1.8
COPB1P53618 AC100870.1-201ENST00000522035 505 ntBASIC3.78□□□□□ -1.8
COPB1P53618 FAM60DP-201ENST00000524174 632 ntBASIC3.78□□□□□ -1.8
COPB1P53618 AC103843.2-201ENST00000530523 682 ntBASIC3.78□□□□□ -1.8
COPB1P53618 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.78□□□□□ -1.8
COPB1P53618 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.78□□□□□ -1.8
COPB1P53618 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.78□□□□□ -1.8
COPB1P53618 AC015917.1-201ENST00000579654 510 ntBASIC3.78□□□□□ -1.8
COPB1P53618 MIR4775-201ENST00000581168 75 ntBASIC3.78□□□□□ -1.8
COPB1P53618 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.78□□□□□ -1.8
COPB1P53618 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.78□□□□□ -1.8
COPB1P53618 IGHV3-29-201ENST00000604817 344 ntBASIC3.78□□□□□ -1.8
COPB1P53618 U73479.1-201ENST00000618062 168 ntBASIC3.78□□□□□ -1.8
COPB1P53618 AC012314.7-201ENST00000619693 93 ntBASIC3.78□□□□□ -1.8
COPB1P53618 AC006065.5-201ENST00000623427 349 ntBASIC3.78□□□□□ -1.8
COPB1P53618 AC022140.2-201ENST00000623500 188 ntBASIC3.78□□□□□ -1.8
COPB1P53618 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COPB1P53618 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.81
COPB1P53618 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
COPB1P53618 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COPB1P53618 AC010733.2-201ENST00000589496 5702 ntBASIC3.77□□□□□ -1.81
COPB1P53618 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.77□□□□□ -1.81
COPB1P53618 AC004972.1-201ENST00000623934 2209 ntBASIC3.77□□□□□ -1.81
COPB1P53618 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
COPB1P53618 AL136372.1-201ENST00000403060 228 ntBASIC3.77□□□□□ -1.81
COPB1P53618 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.77□□□□□ -1.81
COPB1P53618 Z99755.1-201ENST00000414048 380 ntBASIC3.77□□□□□ -1.81
COPB1P53618 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.77□□□□□ -1.81
COPB1P53618 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
COPB1P53618 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.77□□□□□ -1.81
COPB1P53618 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.77□□□□□ -1.81
COPB1P53618 GAPDHP27-201ENST00000447427 1020 ntBASIC3.77□□□□□ -1.81
COPB1P53618 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.77□□□□□ -1.81
COPB1P53618 U3.44-201ENST00000458938 192 ntBASIC3.77□□□□□ -1.81
COPB1P53618 AC006512.1-201ENST00000468816 291 ntBASIC3.77□□□□□ -1.81
COPB1P53618 SNORD60.2-201ENST00000516883 86 ntBASIC3.77□□□□□ -1.81
COPB1P53618 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.77□□□□□ -1.81
COPB1P53618 SUB1P1-201ENST00000524415 382 ntBASIC3.77□□□□□ -1.81
COPB1P53618 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COPB1P53618 AC123904.3-201ENST00000547218 814 ntBASIC3.77□□□□□ -1.81
COPB1P53618 AC126177.3-201ENST00000551839 688 ntBASIC3.77□□□□□ -1.81
COPB1P53618 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.77□□□□□ -1.81
COPB1P53618 AC018638.8-201ENST00000588755 281 ntBASIC3.77□□□□□ -1.81
COPB1P53618 AC005261.5-201ENST00000596280 355 ntBASIC3.77□□□□□ -1.81
COPB1P53618 RNA5SP108-201ENST00000605921 117 ntBASIC3.77□□□□□ -1.81
COPB1P53618 TUG1_2.1-201ENST00000614234 87 ntBASIC3.77□□□□□ -1.81
COPB1P53618 AC004696.1-201ENST00000614345 607 ntBASIC3.77□□□□□ -1.81
COPB1P53618 AC243312.2-201ENST00000623340 601 ntBASIC3.77□□□□□ -1.81
COPB1P53618 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.77□□□□□ -1.81
COPB1P53618 AC012442.3-202ENST00000636742 206 ntBASIC3.77□□□□□ -1.81
COPB1P53618 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.77□□□□□ -1.81
COPB1P53618 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.77□□□□□ -1.81
COPB1P53618 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COPB1P53618 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COPB1P53618 AC093010.3-201ENST00000570269 15214 ntBASIC3.77□□□□□ -1.81
COPB1P53618 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
COPB1P53618 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COPB1P53618 MTND5P17-201ENST00000418405 1603 ntBASIC3.77□□□□□ -1.81
COPB1P53618 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
COPB1P53618 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COPB1P53618 AL139276.1-201ENST00000311910 1001 ntBASIC3.76□□□□□ -1.81
COPB1P53618 Y_RNA.61-201ENST00000362835 102 ntBASIC3.76□□□□□ -1.81
COPB1P53618 Y_RNA.72-201ENST00000362894 103 ntBASIC3.76□□□□□ -1.81
COPB1P53618 Y_RNA.157-201ENST00000363638 102 ntBASIC3.76□□□□□ -1.81
COPB1P53618 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.76□□□□□ -1.81
COPB1P53618 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
COPB1P53618 RNU6-837P-201ENST00000391056 108 ntBASIC3.76□□□□□ -1.81
COPB1P53618 RNU4-65P-201ENST00000410473 140 ntBASIC3.76□□□□□ -1.81
COPB1P53618 RNU2-39P-201ENST00000410604 198 ntBASIC3.76□□□□□ -1.81
COPB1P53618 RNU6-373P-201ENST00000411247 98 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AC093578.1-201ENST00000415219 368 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AL356968.1-201ENST00000416622 474 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AL035423.1-201ENST00000420331 213 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AL137014.1-201ENST00000420490 1226 ntBASIC3.76□□□□□ -1.81
COPB1P53618 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.76□□□□□ -1.81
COPB1P53618 MTCYBP8-201ENST00000422855 651 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AL513185.2-201ENST00000425543 193 ntBASIC3.76□□□□□ -1.81
COPB1P53618 SRIP2-201ENST00000428470 166 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.76□□□□□ -1.81
COPB1P53618 AL136097.1-201ENST00000456945 913 ntBASIC3.76□□□□□ -1.81
COPB1P53618 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.76□□□□□ -1.81
COPB1P53618 RPL9P32-201ENST00000464118 620 ntBASIC3.76□□□□□ -1.81
COPB1P53618 MRPS17P3-201ENST00000465453 385 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.76□□□□□ -1.81
COPB1P53618 AC116562.3-201ENST00000506136 177 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AC026427.2-201ENST00000506228 536 ntBASIC3.76□□□□□ -1.81
COPB1P53618 AC010486.1-201ENST00000511793 424 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms