Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 Y_RNA.472-201ENST00000384322 102 ntBASIC2.44□□□□□ -2.02
ACLYP53396 RNU6-1000P-201ENST00000391066 106 ntBASIC2.44□□□□□ -2.02
ACLYP53396 ZNF863P-201ENST00000426746 417 ntBASIC2.44□□□□□ -2.02
ACLYP53396 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.44□□□□□ -2.02
ACLYP53396 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.44□□□□□ -2.02
ACLYP53396 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.44□□□□□ -2.02
ACLYP53396 AC104563.1-201ENST00000476147 376 ntBASIC2.44□□□□□ -2.02
ACLYP53396 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.44□□□□□ -2.02
ACLYP53396 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.44□□□□□ -2.02
ACLYP53396 AC114786.4-201ENST00000508771 728 ntBASIC2.44□□□□□ -2.02
ACLYP53396 AC114797.1-201ENST00000514003 728 ntBASIC2.44□□□□□ -2.02
ACLYP53396 RPPH1-2P-201ENST00000516688 293 ntBASIC2.44□□□□□ -2.02
ACLYP53396 NRON-201ENST00000517270 370 ntBASIC2.44□□□□□ -2.02
ACLYP53396 AC022634.1-201ENST00000520765 532 ntBASIC2.44□□□□□ -2.02
ACLYP53396 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ACLYP53396 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.44□□□□□ -2.02
ACLYP53396 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.44□□□□□ -2.02
ACLYP53396 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
ACLYP53396 BNIP3P26-201ENST00000600827 554 ntBASIC2.44□□□□□ -2.02
ACLYP53396 AC024560.3-201ENST00000608482 349 ntBASIC2.44□□□□□ -2.02
ACLYP53396 AC103710.2-201ENST00000609912 942 ntBASIC2.44□□□□□ -2.02
ACLYP53396 PART1_2.1-201ENST00000612397 250 ntBASIC2.44□□□□□ -2.02
ACLYP53396 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.44□□□□□ -2.02
ACLYP53396 AC010297.1-201ENST00000623948 149 ntBASIC2.44□□□□□ -2.02
ACLYP53396 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.44□□□□□ -2.02
ACLYP53396 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.44□□□□□ -2.02
ACLYP53396 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ACLYP53396 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.43□□□□□ -2.02
ACLYP53396 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ACLYP53396 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ACLYP53396 RNU6-560P-201ENST00000364007 108 ntBASIC2.43□□□□□ -2.02
ACLYP53396 SNORA68.1-201ENST00000364537 132 ntBASIC2.43□□□□□ -2.02
ACLYP53396 RNU6-114P-201ENST00000384704 105 ntBASIC2.43□□□□□ -2.02
ACLYP53396 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.43□□□□□ -2.02
ACLYP53396 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
ACLYP53396 U3.20-201ENST00000390909 217 ntBASIC2.43□□□□□ -2.02
ACLYP53396 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ACLYP53396 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.43□□□□□ -2.02
ACLYP53396 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.43□□□□□ -2.02
ACLYP53396 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.43□□□□□ -2.02
ACLYP53396 MORF4L1P6-201ENST00000418771 268 ntBASIC2.43□□□□□ -2.02
ACLYP53396 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.43□□□□□ -2.02
ACLYP53396 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.43□□□□□ -2.02
ACLYP53396 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.43□□□□□ -2.02
ACLYP53396 AC007677.1-201ENST00000445757 515 ntBASIC2.43□□□□□ -2.02
ACLYP53396 RPS15AP34-201ENST00000487776 387 ntBASIC2.43□□□□□ -2.02
ACLYP53396 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.43□□□□□ -2.02
ACLYP53396 AC117522.2-201ENST00000510049 657 ntBASIC2.43□□□□□ -2.02
ACLYP53396 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.43□□□□□ -2.02
ACLYP53396 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.43□□□□□ -2.02
ACLYP53396 SCARNA16.3-201ENST00000516595 184 ntBASIC2.43□□□□□ -2.02
ACLYP53396 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
ACLYP53396 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.43□□□□□ -2.02
ACLYP53396 OR4K7P-201ENST00000580232 945 ntBASIC2.43□□□□□ -2.02
ACLYP53396 HMGN2P15-201ENST00000585707 270 ntBASIC2.43□□□□□ -2.02
ACLYP53396 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.43□□□□□ -2.02
ACLYP53396 AC245517.5-201ENST00000611529 162 ntBASIC2.43□□□□□ -2.02
ACLYP53396 AC034102.8-201ENST00000615146 484 ntBASIC2.43□□□□□ -2.02
ACLYP53396 AC010378.1-201ENST00000619270 362 ntBASIC2.43□□□□□ -2.02
ACLYP53396 MIR6132-201ENST00000622083 109 ntBASIC2.43□□□□□ -2.02
ACLYP53396 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
ACLYP53396 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
ACLYP53396 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ACLYP53396 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
ACLYP53396 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
ACLYP53396 ZNF271P-202ENST00000465539 1970 ntBASIC2.42□□□□□ -2.02
ACLYP53396 AC092447.10-201ENST00000620607 1652 ntBASIC2.42□□□□□ -2.02
ACLYP53396 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ACLYP53396 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.42□□□□□ -2.02
ACLYP53396 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ACLYP53396 RNU6-621P-201ENST00000364752 109 ntBASIC2.42□□□□□ -2.02
ACLYP53396 SNORD116-12-201ENST00000384468 92 ntBASIC2.42□□□□□ -2.02
ACLYP53396 SNORA26.9-201ENST00000391322 122 ntBASIC2.42□□□□□ -2.02
ACLYP53396 AL356421.1-201ENST00000403255 413 ntBASIC2.42□□□□□ -2.02
ACLYP53396 MIR1284-201ENST00000408337 120 ntBASIC2.42□□□□□ -2.02
ACLYP53396 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.42□□□□□ -2.02
ACLYP53396 RNU6-516P-201ENST00000411381 104 ntBASIC2.42□□□□□ -2.02
ACLYP53396 AL953862.1-201ENST00000423016 168 ntBASIC2.42□□□□□ -2.02
ACLYP53396 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.42□□□□□ -2.02
ACLYP53396 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.42□□□□□ -2.02
ACLYP53396 HMGB1P36-201ENST00000487709 576 ntBASIC2.42□□□□□ -2.02
ACLYP53396 AIG1P1-201ENST00000503376 148 ntBASIC2.42□□□□□ -2.02
ACLYP53396 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.42□□□□□ -2.02
ACLYP53396 AC091163.3-201ENST00000518269 1144 ntBASIC2.42□□□□□ -2.02
ACLYP53396 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
ACLYP53396 AC021451.1-201ENST00000523498 1129 ntBASIC2.42□□□□□ -2.02
ACLYP53396 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
ACLYP53396 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.42□□□□□ -2.02
ACLYP53396 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.42□□□□□ -2.02
ACLYP53396 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.42□□□□□ -2.02
ACLYP53396 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.42□□□□□ -2.02
ACLYP53396 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.42□□□□□ -2.02
ACLYP53396 AL160237.3-201ENST00000604114 1013 ntBASIC2.42□□□□□ -2.02
ACLYP53396 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.42□□□□□ -2.02
ACLYP53396 AC008498.1-201ENST00000613012 531 ntBASIC2.42□□□□□ -2.02
ACLYP53396 AC009831.4-201ENST00000620744 325 ntBASIC2.42□□□□□ -2.02
ACLYP53396 AC019226.1-201ENST00000625666 515 ntBASIC2.42□□□□□ -2.02
ACLYP53396 MTND1P37-201ENST00000636562 264 ntBASIC2.42□□□□□ -2.02
ACLYP53396 AC106858.1-201ENST00000637497 429 ntBASIC2.42□□□□□ -2.02
ACLYP53396 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms