Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC068944.2-201ENST00000610373 403 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 AC096577.2-201ENST00000611455 153 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 AC002076.2-201ENST00000617362 122 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 AL356321.1-201ENST00000621360 228 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CLCNKAP51800 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLCNKAP51800 AC090740.1-201ENST00000623193 2262 ntBASIC3.31□□□□□ -1.88
CLCNKAP51800 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.31□□□□□ -1.88
CLCNKAP51800 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLCNKAP51800 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CLCNKAP51800 ZNF807-201ENST00000328088 1707 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
CLCNKAP51800 AL079305.1-201ENST00000623159 3008 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 RNU6-223P-201ENST00000362830 107 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CLCNKAP51800 RNU6-76P-201ENST00000384060 104 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 AL354719.1-201ENST00000406535 843 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 RNU6-1077P-201ENST00000410506 102 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 YPEL5P1-201ENST00000419731 367 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 EIF1P1-201ENST00000421436 341 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 AL353193.1-201ENST00000421444 268 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 ISCA1P1-201ENST00000426679 387 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.3□□□□□ -1.88
CLCNKAP51800 GPR143P-201ENST00000434155 205 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 UBE2V1P8-201ENST00000437166 265 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 RPS15AP9-201ENST00000439856 381 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 GAPDHP27-201ENST00000447427 1020 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 AC008264.1-201ENST00000447612 367 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.3□□□□□ -1.88
CLCNKAP51800 RPS4XP2-201ENST00000458402 793 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 ARL4AP2-201ENST00000507378 601 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 APOOP4-201ENST00000513530 597 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 AP001804.3-201ENST00000525146 880 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 AP001893.2-201ENST00000526949 202 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 AC011979.2-201ENST00000527568 352 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 SNRPGP16-201ENST00000533275 226 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 AC011602.1-201ENST00000546484 331 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.3□□□□□ -1.88
CLCNKAP51800 AP001094.1-201ENST00000579805 193 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 MIR4276-201ENST00000584832 70 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.3□□□□□ -1.88
CLCNKAP51800 AP001330.4-201ENST00000604350 154 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 AC012468.1-201ENST00000604888 430 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 AC012443.1-201ENST00000605605 231 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 AC090517.2-201ENST00000614966 680 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 U4.5-201ENST00000617137 123 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.3□□□□□ -1.88
CLCNKAP51800 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLCNKAP51800 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLCNKAP51800 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLCNKAP51800 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLCNKAP51800 ELF2P3-201ENST00000445099 1506 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CLCNKAP51800 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLCNKAP51800 Y_RNA.22-201ENST00000362492 102 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AP002088.1-201ENST00000382740 395 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 MIR181A1-201ENST00000385026 110 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 SNORA48.8-201ENST00000391324 134 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC068050.1-201ENST00000394891 380 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AL136372.1-201ENST00000403060 228 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLCNKAP51800 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCNKAP51800 AC126124.2-201ENST00000413542 321 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCNKAP51800 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCNKAP51800 DPPA2P1-201ENST00000428060 556 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC093106.2-201ENST00000428212 385 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC005300.1-201ENST00000428401 373 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCNKAP51800 RPL23AP31-201ENST00000456160 467 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.29□□□□□ -1.88
CLCNKAP51800 AL121769.1-201ENST00000469473 401 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AP002884.2-201ENST00000471647 395 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.29□□□□□ -1.88
CLCNKAP51800 AC010631.1-201ENST00000474150 156 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC006483.1-201ENST00000487308 313 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC019235.1-201ENST00000503847 207 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC110794.1-201ENST00000505816 425 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 MTND4LP22-201ENST00000508209 276 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC009646.1-201ENST00000510455 318 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 HMGB1P41-201ENST00000520234 440 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC022690.1-201ENST00000526681 550 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AK6P1-201ENST00000540219 478 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC128657.1-201ENST00000549459 145 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 ZNF519P2-201ENST00000557032 169 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC037471.2-201ENST00000564941 598 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCNKAP51800 AC005951.2-201ENST00000576282 495 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC105224.1-201ENST00000587055 421 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCNKAP51800 AL162713.1-201ENST00000604480 262 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC073657.2-201ENST00000605661 303 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AC099778.2-201ENST00000610904 211 ntBASIC3.29□□□□□ -1.88
CLCNKAP51800 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCNKAP51800 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.29□□□□□ -1.88
CLCNKAP51800 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCNKAP51800 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLCNKAP51800 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms