Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.32□□□□□ -2.04
RFX3P48380 AC105252.1-201ENST00000503089 286 ntBASIC2.32□□□□□ -2.04
RFX3P48380 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.32□□□□□ -2.04
RFX3P48380 AC093809.1-201ENST00000509155 340 ntBASIC2.32□□□□□ -2.04
RFX3P48380 RN7SKP24-201ENST00000515888 284 ntBASIC2.32□□□□□ -2.04
RFX3P48380 RNA5SP282-201ENST00000516355 108 ntBASIC2.32□□□□□ -2.04
RFX3P48380 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.32□□□□□ -2.04
RFX3P48380 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.32□□□□□ -2.04
RFX3P48380 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.32□□□□□ -2.04
RFX3P48380 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.32□□□□□ -2.04
RFX3P48380 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.32□□□□□ -2.04
RFX3P48380 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.32□□□□□ -2.04
RFX3P48380 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.32□□□□□ -2.04
RFX3P48380 AL391001.1-201ENST00000602747 715 ntBASIC2.32□□□□□ -2.04
RFX3P48380 AL136370.1-201ENST00000608166 691 ntBASIC2.32□□□□□ -2.04
RFX3P48380 PCMTD1P7-201ENST00000634506 357 ntBASIC2.32□□□□□ -2.04
RFX3P48380 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RFX3P48380 AC093536.2-201ENST00000565257 1406 ntBASIC2.32□□□□□ -2.04
RFX3P48380 AC004944.1-201ENST00000517807 3059 ntBASIC2.31□□□□□ -2.04
RFX3P48380 ZNF29P-201ENST00000225587 168 ntBASIC2.31□□□□□ -2.04
RFX3P48380 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RFX3P48380 RNU6-777P-201ENST00000364265 104 ntBASIC2.31□□□□□ -2.04
RFX3P48380 RNU1-138P-201ENST00000384093 164 ntBASIC2.31□□□□□ -2.04
RFX3P48380 MTCO1P17-201ENST00000411522 491 ntBASIC2.31□□□□□ -2.04
RFX3P48380 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.31□□□□□ -2.04
RFX3P48380 AC098826.1-201ENST00000433943 471 ntBASIC2.31□□□□□ -2.04
RFX3P48380 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.31□□□□□ -2.04
RFX3P48380 RPL26P9-201ENST00000457466 433 ntBASIC2.31□□□□□ -2.04
RFX3P48380 AC126389.1-201ENST00000477436 290 ntBASIC2.31□□□□□ -2.04
RFX3P48380 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.31□□□□□ -2.04
RFX3P48380 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.31□□□□□ -2.04
RFX3P48380 AC104090.1-201ENST00000506341 1171 ntBASIC2.31□□□□□ -2.04
RFX3P48380 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.31□□□□□ -2.04
RFX3P48380 AC093281.2-201ENST00000510153 597 ntBASIC2.31□□□□□ -2.04
RFX3P48380 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.31□□□□□ -2.04
RFX3P48380 RNA5SP320-201ENST00000516263 124 ntBASIC2.31□□□□□ -2.04
RFX3P48380 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.31□□□□□ -2.04
RFX3P48380 OR4R1P-201ENST00000529879 463 ntBASIC2.31□□□□□ -2.04
RFX3P48380 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.31□□□□□ -2.04
RFX3P48380 MTCO2P2-201ENST00000591258 225 ntBASIC2.31□□□□□ -2.04
RFX3P48380 AL049779.4-201ENST00000604500 156 ntBASIC2.31□□□□□ -2.04
RFX3P48380 AL137847.3-201ENST00000611521 109 ntBASIC2.31□□□□□ -2.04
RFX3P48380 SDR42E1P2-201ENST00000614861 481 ntBASIC2.31□□□□□ -2.04
RFX3P48380 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.31□□□□□ -2.04
RFX3P48380 AC006927.4-201ENST00000639187 543 ntBASIC2.31□□□□□ -2.04
RFX3P48380 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
RFX3P48380 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RFX3P48380 AL136360.1-201ENST00000503377 1900 ntBASIC2.3□□□□□ -2.04
RFX3P48380 U8.8-201ENST00000365399 135 ntBASIC2.3□□□□□ -2.04
RFX3P48380 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RFX3P48380 RNU6-432P-201ENST00000384196 109 ntBASIC2.3□□□□□ -2.04
RFX3P48380 AL445529.1-201ENST00000398713 389 ntBASIC2.3□□□□□ -2.04
RFX3P48380 MIR888-201ENST00000401186 77 ntBASIC2.3□□□□□ -2.04
RFX3P48380 RPS4XP8-201ENST00000402039 771 ntBASIC2.3□□□□□ -2.04
RFX3P48380 UBE2FP1-201ENST00000416536 447 ntBASIC2.3□□□□□ -2.04
RFX3P48380 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.3□□□□□ -2.04
RFX3P48380 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.3□□□□□ -2.04
RFX3P48380 AL009048.1-201ENST00000450437 298 ntBASIC2.3□□□□□ -2.04
RFX3P48380 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.3□□□□□ -2.04
RFX3P48380 AC233279.1-201ENST00000455300 423 ntBASIC2.3□□□□□ -2.04
RFX3P48380 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.3□□□□□ -2.04
RFX3P48380 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.3□□□□□ -2.04
RFX3P48380 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.3□□□□□ -2.04
RFX3P48380 RPS15AP36-201ENST00000492022 382 ntBASIC2.3□□□□□ -2.04
RFX3P48380 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.3□□□□□ -2.04
RFX3P48380 AC118465.1-201ENST00000513820 1271 ntBASIC2.3□□□□□ -2.04
RFX3P48380 RNA5SP148-201ENST00000516527 94 ntBASIC2.3□□□□□ -2.04
RFX3P48380 UBTFL10-201ENST00000528532 562 ntBASIC2.3□□□□□ -2.04
RFX3P48380 AC234778.2-201ENST00000566241 354 ntBASIC2.3□□□□□ -2.04
RFX3P48380 MIR4446-201ENST00000578505 67 ntBASIC2.3□□□□□ -2.04
RFX3P48380 UBE2L4-201ENST00000587688 464 ntBASIC2.3□□□□□ -2.04
RFX3P48380 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.3□□□□□ -2.04
RFX3P48380 AL356280.1-201ENST00000603614 379 ntBASIC2.3□□□□□ -2.04
RFX3P48380 AC007621.1-201ENST00000604544 437 ntBASIC2.3□□□□□ -2.04
RFX3P48380 AC013562.2-201ENST00000611632 603 ntBASIC2.3□□□□□ -2.04
RFX3P48380 MIR6817-201ENST00000615588 66 ntBASIC2.3□□□□□ -2.04
RFX3P48380 HMGB1P24-202ENST00000615653 685 ntBASIC2.3□□□□□ -2.04
RFX3P48380 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.3□□□□□ -2.04
RFX3P48380 AL158801.5-201ENST00000623123 465 ntBASIC2.3□□□□□ -2.04
RFX3P48380 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RFX3P48380 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
RFX3P48380 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
RFX3P48380 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RFX3P48380 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX3P48380 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RFX3P48380 SNORA4.1-201ENST00000364263 144 ntBASIC2.29□□□□□ -2.04
RFX3P48380 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
RFX3P48380 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
RFX3P48380 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RFX3P48380 MIR27B-201ENST00000385129 97 ntBASIC2.29□□□□□ -2.04
RFX3P48380 RNU6-1242P-201ENST00000391052 103 ntBASIC2.29□□□□□ -2.04
RFX3P48380 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.29□□□□□ -2.04
RFX3P48380 RPS4XP7-201ENST00000406274 780 ntBASIC2.29□□□□□ -2.04
RFX3P48380 RNU6-584P-201ENST00000410350 95 ntBASIC2.29□□□□□ -2.04
RFX3P48380 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX3P48380 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX3P48380 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.29□□□□□ -2.04
RFX3P48380 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.29□□□□□ -2.04
RFX3P48380 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX3P48380 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms