Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HADHAP40939 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.29□□□□□ -1.88
HADHAP40939 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.29□□□□□ -1.88
HADHAP40939 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.29□□□□□ -1.88
HADHAP40939 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.29□□□□□ -1.88
HADHAP40939 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.29□□□□□ -1.88
HADHAP40939 AL591516.1-201ENST00000611326 274 ntBASIC3.29□□□□□ -1.88
HADHAP40939 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HADHAP40939 AL365204.3-201ENST00000612448 685 ntBASIC3.29□□□□□ -1.88
HADHAP40939 AL442067.2-201ENST00000614033 363 ntBASIC3.29□□□□□ -1.88
HADHAP40939 AL161629.2-201ENST00000615347 275 ntBASIC3.29□□□□□ -1.88
HADHAP40939 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.29□□□□□ -1.88
HADHAP40939 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.29□□□□□ -1.88
HADHAP40939 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.29□□□□□ -1.88
HADHAP40939 AC008669.1-201ENST00000565823 2178 ntBASIC3.28□□□□□ -1.88
HADHAP40939 RNU6-701P-201ENST00000384059 107 ntBASIC3.28□□□□□ -1.88
HADHAP40939 RPL17P50-201ENST00000396131 546 ntBASIC3.28□□□□□ -1.88
HADHAP40939 RPS3AP36-201ENST00000398190 775 ntBASIC3.28□□□□□ -1.88
HADHAP40939 RNA5SP120-201ENST00000410900 112 ntBASIC3.28□□□□□ -1.88
HADHAP40939 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.28□□□□□ -1.88
HADHAP40939 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.28□□□□□ -1.88
HADHAP40939 OR2AS1P-201ENST00000427827 319 ntBASIC3.28□□□□□ -1.88
HADHAP40939 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.28□□□□□ -1.88
HADHAP40939 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.28□□□□□ -1.88
HADHAP40939 AC009961.2-201ENST00000435771 251 ntBASIC3.28□□□□□ -1.88
HADHAP40939 RPS24P1-201ENST00000438550 371 ntBASIC3.28□□□□□ -1.88
HADHAP40939 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.28□□□□□ -1.88
HADHAP40939 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.28□□□□□ -1.88
HADHAP40939 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.28□□□□□ -1.88
HADHAP40939 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.28□□□□□ -1.88
HADHAP40939 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.28□□□□□ -1.88
HADHAP40939 MTND1P27-201ENST00000451117 902 ntBASIC3.28□□□□□ -1.88
HADHAP40939 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.28□□□□□ -1.88
HADHAP40939 snoU13.28-201ENST00000459235 104 ntBASIC3.28□□□□□ -1.88
HADHAP40939 RNU7-23P-201ENST00000459465 62 ntBASIC3.28□□□□□ -1.88
HADHAP40939 AC080014.1-201ENST00000496877 1201 ntBASIC3.28□□□□□ -1.88
HADHAP40939 AC110794.1-201ENST00000505816 425 ntBASIC3.28□□□□□ -1.88
HADHAP40939 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.28□□□□□ -1.88
HADHAP40939 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.28□□□□□ -1.88
HADHAP40939 SNORA74D-201ENST00000516404 141 ntBASIC3.28□□□□□ -1.88
HADHAP40939 Vault.3-201ENST00000516676 95 ntBASIC3.28□□□□□ -1.88
HADHAP40939 SNORA31.21-201ENST00000517180 77 ntBASIC3.28□□□□□ -1.88
HADHAP40939 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
HADHAP40939 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.28□□□□□ -1.88
HADHAP40939 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HADHAP40939 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.28□□□□□ -1.88
HADHAP40939 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.28□□□□□ -1.88
HADHAP40939 RPL21P12-201ENST00000559810 515 ntBASIC3.28□□□□□ -1.88
HADHAP40939 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.28□□□□□ -1.88
HADHAP40939 AC073544.2-201ENST00000601155 540 ntBASIC3.28□□□□□ -1.88
HADHAP40939 AC098826.3-201ENST00000603823 466 ntBASIC3.28□□□□□ -1.88
HADHAP40939 DPPA3P3-201ENST00000603842 430 ntBASIC3.28□□□□□ -1.88
HADHAP40939 SEPT7P9-203ENST00000604116 343 ntBASIC3.28□□□□□ -1.88
HADHAP40939 AL162713.1-201ENST00000604480 262 ntBASIC3.28□□□□□ -1.88
HADHAP40939 AP002360.4-201ENST00000606980 481 ntBASIC3.28□□□□□ -1.88
HADHAP40939 AC135507.1-201ENST00000607214 561 ntBASIC3.28□□□□□ -1.88
HADHAP40939 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.28□□□□□ -1.88
HADHAP40939 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.28□□□□□ -1.88
HADHAP40939 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.28□□□□□ -1.88
HADHAP40939 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.28□□□□□ -1.88
HADHAP40939 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.28□□□□□ -1.88
HADHAP40939 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HADHAP40939 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HADHAP40939 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HADHAP40939 TEX21P-201ENST00000447107 1476 ntBASIC3.28□□□□□ -1.88
HADHAP40939 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
HADHAP40939 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HADHAP40939 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.27□□□□□ -1.89
HADHAP40939 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HADHAP40939 RNU1-70P-201ENST00000362618 164 ntBASIC3.27□□□□□ -1.89
HADHAP40939 U8.3-201ENST00000363321 132 ntBASIC3.27□□□□□ -1.89
HADHAP40939 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HADHAP40939 AC007899.1-201ENST00000412776 775 ntBASIC3.27□□□□□ -1.89
HADHAP40939 AC099548.1-201ENST00000421443 426 ntBASIC3.27□□□□□ -1.89
HADHAP40939 ISCA1P1-201ENST00000426679 387 ntBASIC3.27□□□□□ -1.89
HADHAP40939 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.27□□□□□ -1.89
HADHAP40939 AC009969.1-201ENST00000438726 172 ntBASIC3.27□□□□□ -1.89
HADHAP40939 AL714022.1-201ENST00000439897 151 ntBASIC3.27□□□□□ -1.89
HADHAP40939 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.27□□□□□ -1.89
HADHAP40939 RNU6-956P-201ENST00000458868 103 ntBASIC3.27□□□□□ -1.89
HADHAP40939 AC008155.2-201ENST00000464337 397 ntBASIC3.27□□□□□ -1.89
HADHAP40939 MTND4LP3-201ENST00000468320 276 ntBASIC3.27□□□□□ -1.89
HADHAP40939 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.27□□□□□ -1.89
HADHAP40939 AC026801.1-201ENST00000497178 464 ntBASIC3.27□□□□□ -1.89
HADHAP40939 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.27□□□□□ -1.89
HADHAP40939 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.27□□□□□ -1.89
HADHAP40939 RNU1-143P-201ENST00000516296 146 ntBASIC3.27□□□□□ -1.89
HADHAP40939 RN7SKP282-201ENST00000516824 299 ntBASIC3.27□□□□□ -1.89
HADHAP40939 SCARNA20.6-201ENST00000517251 106 ntBASIC3.27□□□□□ -1.89
HADHAP40939 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.27□□□□□ -1.89
HADHAP40939 AC245166.1-201ENST00000521012 253 ntBASIC3.27□□□□□ -1.89
HADHAP40939 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
HADHAP40939 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.27□□□□□ -1.89
HADHAP40939 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.27□□□□□ -1.89
HADHAP40939 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.27□□□□□ -1.89
HADHAP40939 AC137800.2-201ENST00000574375 120 ntBASIC3.27□□□□□ -1.89
HADHAP40939 NBR2-204ENST00000587322 63 ntBASIC3.27□□□□□ -1.89
HADHAP40939 AL161798.1-201ENST00000604630 131 ntBASIC3.27□□□□□ -1.89
HADHAP40939 AC090578.1-201ENST00000604955 591 ntBASIC3.27□□□□□ -1.89
HADHAP40939 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms