Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HOXC12P31275 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC12P31275 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC12P31275 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXC12P31275 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC12P31275 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXC12P31275 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC12P31275 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC12P31275 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC12P31275 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC12P31275 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
HOXC12P31275 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC12P31275 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
HOXC12P31275 Y_RNA.126-201ENST00000363382 111 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 RNA5SP479-201ENST00000364858 117 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 RNU6-1105P-201ENST00000384774 107 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.26□□□□□ -1.73
HOXC12P31275 AC104333.2-201ENST00000422630 192 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXC12P31275 NOTCH2P1-201ENST00000443481 624 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXC12P31275 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXC12P31275 FTH1P25-201ENST00000447665 469 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 RNU1-6P-201ENST00000516290 144 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 SNORA70.16-201ENST00000516390 95 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 RNU2-58P-201ENST00000516403 183 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 RNU6-307P-201ENST00000516743 106 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 RNU6-264P-201ENST00000517134 104 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC12P31275 AP003122.3-201ENST00000526316 255 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 AC084851.1-201ENST00000529105 249 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXC12P31275 AC133555.2-201ENST00000550213 292 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXC12P31275 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXC12P31275 MIR4277-201ENST00000578298 84 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 RN7SL176P-201ENST00000580352 264 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 RN7SL690P-201ENST00000582087 240 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 AL160281.1-201ENST00000605307 311 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 FAM27B-201ENST00000610601 213 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 AC090132.2-201ENST00000615881 347 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 MIR6830-201ENST00000636015 70 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC12P31275 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC12P31275 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXC12P31275 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC12P31275 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC12P31275 AC106871.1-201ENST00000568324 3102 ntBASIC4.26□□□□□ -1.73
HOXC12P31275 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC12P31275 LINC01355-201ENST00000566551 5444 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC12P31275 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC12P31275 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXC12P31275 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXC12P31275 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC12P31275 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC12P31275 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC12P31275 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXC12P31275 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC12P31275 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC12P31275 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC12P31275 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HOXC12P31275 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXC12P31275 RNU1-94P-201ENST00000362627 173 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 RNU6-1309P-201ENST00000363305 108 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 Y_RNA.133-201ENST00000363428 110 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 Y_RNA.158-201ENST00000363651 101 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 SNORA7.2-201ENST00000364446 145 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 Y_RNA.364-201ENST00000365532 101 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 RNU6-842P-201ENST00000384269 107 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 RNU6-790P-201ENST00000384479 105 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC12P31275 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC12P31275 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC12P31275 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC12P31275 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC12P31275 RPL21P66-201ENST00000426566 466 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC12P31275 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC12P31275 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC12P31275 AURKAPS2-201ENST00000454983 333 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 AC008571.1-201ENST00000467232 300 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 RPS23P3-201ENST00000470993 430 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 AL135752.1-201ENST00000479477 471 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 SLC25A15P5-201ENST00000508033 253 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 AC023442.1-201ENST00000531247 422 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC12P31275 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXC12P31275 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC12P31275 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXC12P31275 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXC12P31275 MIR4680-201ENST00000580906 66 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 MIR4715-201ENST00000584117 79 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 AC005899.2-201ENST00000584353 90 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HOXC12P31275 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXC12P31275 AL121932.1-201ENST00000605542 214 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 AC005014.2-201ENST00000607795 599 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 RMST_4.1-201ENST00000616886 107 ntBASIC4.25□□□□□ -1.73
HOXC12P31275 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms