Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC125611.1-201ENST00000549563 229 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
COL5A1P20908 HIGD1AP17-201ENST00000554576 276 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.93□□□□□ -2.1
COL5A1P20908 AC103810.1-201ENST00000579873 453 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.93□□□□□ -2.1
COL5A1P20908 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC1.93□□□□□ -2.1
COL5A1P20908 AC068790.3-201ENST00000602988 553 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 AL049779.4-201ENST00000604500 156 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 AC018714.1-201ENST00000605028 208 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.93□□□□□ -2.1
COL5A1P20908 RNU6-88P-201ENST00000606801 100 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 AC080013.3-201ENST00000606839 578 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.93□□□□□ -2.1
COL5A1P20908 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.93□□□□□ -2.1
COL5A1P20908 AC092140.2-201ENST00000618027 521 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 AL589994.2-201ENST00000621124 579 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.93□□□□□ -2.1
COL5A1P20908 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
COL5A1P20908 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.92□□□□□ -2.1
COL5A1P20908 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
COL5A1P20908 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
COL5A1P20908 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.92□□□□□ -2.1
COL5A1P20908 MTCO3P30-201ENST00000426425 670 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 RPP40P1-201ENST00000426762 456 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.92□□□□□ -2.1
COL5A1P20908 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.92□□□□□ -2.1
COL5A1P20908 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
COL5A1P20908 RNA5SP135-201ENST00000517019 125 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 HIGD1AP6-201ENST00000521833 279 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 DEFB131D-201ENST00000526803 184 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 PTP4A1P6-201ENST00000531034 478 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.92□□□□□ -2.1
COL5A1P20908 AL133393.1-201ENST00000603277 287 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 AL022161.1-201ENST00000604390 213 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 AC010738.1-201ENST00000604970 987 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 AC105129.3-201ENST00000605455 485 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 AC131235.4-201ENST00000609288 620 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 AL139418.1-201ENST00000613613 177 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
COL5A1P20908 AC231657.1-201ENST00000624313 397 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.92□□□□□ -2.1
COL5A1P20908 AC116618.1-201ENST00000634617 774 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL5A1P20908 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
COL5A1P20908 AL049737.1-201ENST00000413920 1403 ntBASIC1.92□□□□□ -2.1
COL5A1P20908 Y_RNA.25-201ENST00000362528 102 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 Y_RNA.194-201ENST00000363985 102 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 RNY1P14-201ENST00000384426 108 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 HNRNPDP2-201ENST00000406475 478 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.91□□□□□ -2.1
COL5A1P20908 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.91□□□□□ -2.1
COL5A1P20908 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.91□□□□□ -2.1
COL5A1P20908 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.91□□□□□ -2.1
COL5A1P20908 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.91□□□□□ -2.1
COL5A1P20908 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.91□□□□□ -2.1
COL5A1P20908 RPL23AP7-203ENST00000449021 469 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 RPL18AP17-201ENST00000455326 198 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.91□□□□□ -2.1
COL5A1P20908 RPS15AP1-201ENST00000457423 391 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 SYPL1P1-201ENST00000473622 768 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 RNA5SP182-201ENST00000516064 82 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 HMGN1P28-201ENST00000521340 364 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AC239860.2-201ENST00000525886 270 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
COL5A1P20908 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.91□□□□□ -2.1
COL5A1P20908 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.91□□□□□ -2.1
COL5A1P20908 SUB1P3-201ENST00000564581 315 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 PCMTD1P2-201ENST00000565017 355 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AC074051.3-201ENST00000570238 358 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 LRRC37A5P-203ENST00000580181 585 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 MIR3690-201ENST00000580266 75 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AP001180.3-201ENST00000582221 145 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AC008687.2-201ENST00000597865 520 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AC012557.2-201ENST00000605919 418 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 MIR6779-201ENST00000617283 64 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 uc_338.9-201ENST00000617424 182 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AC091953.2-201ENST00000623979 160 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.91□□□□□ -2.1
COL5A1P20908 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL5A1P20908 SGO1P2-201ENST00000429458 1589 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.91□□□□□ -2.1
COL5A1P20908 SUGT1P1-201ENST00000379514 476 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.91□□□□□ -2.1
COL5A1P20908 RNU6-575P-201ENST00000411326 105 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AL136133.1-201ENST00000413694 376 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 FCF1P2-201ENST00000415284 583 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 USP9YP27-201ENST00000418455 438 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 Z99497.1-201ENST00000421282 135 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 MTCO3P1-205ENST00000422088 832 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AC241584.1-201ENST00000438469 1241 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.91□□□□□ -2.1
COL5A1P20908 AC013828.1-201ENST00000481845 158 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AC140059.1-201ENST00000489238 361 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.91□□□□□ -2.1
COL5A1P20908 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.91□□□□□ -2.1
COL5A1P20908 RNU6-885P-201ENST00000516607 104 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms