Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LMNB1P20700 MTND4P1-201ENST00000457501 1466 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMNB1P20700 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMNB1P20700 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.07□□□□□ -1.6
LMNB1P20700 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
LMNB1P20700 RNU6-1279P-201ENST00000383917 103 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 RNU6-639P-201ENST00000384074 107 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 RNU6-601P-201ENST00000384540 107 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 CISD1P1-201ENST00000393907 327 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 AL139039.1-201ENST00000401900 692 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 SNORA74C-2-201ENST00000411179 201 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 AL137014.1-201ENST00000420490 1226 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.07□□□□□ -1.6
LMNB1P20700 PPP1R11P2-201ENST00000423543 382 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 RPL21P91-201ENST00000429231 479 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 RPL23AP25-201ENST00000430973 463 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.07□□□□□ -1.6
LMNB1P20700 HMGN2P31-201ENST00000432430 273 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 CKS1BP5-201ENST00000434172 273 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.07□□□□□ -1.6
LMNB1P20700 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.07□□□□□ -1.6
LMNB1P20700 RPS11P1-201ENST00000451072 473 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.07□□□□□ -1.6
LMNB1P20700 MIR2053-201ENST00000459295 91 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 PPIAP15-201ENST00000479662 484 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.07□□□□□ -1.6
LMNB1P20700 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.07□□□□□ -1.6
LMNB1P20700 RNU2-69P-201ENST00000516061 100 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 Y_RNA.689-201ENST00000516589 107 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 CYCSP30-201ENST00000546447 172 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 AC093012.1-202ENST00000549403 582 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.07□□□□□ -1.6
LMNB1P20700 AL138889.2-201ENST00000603883 242 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 AL137003.2-201ENST00000606924 2538 ntBASIC5.07□□□□□ -1.6
LMNB1P20700 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMNB1P20700 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LMNB1P20700 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LMNB1P20700 MTND5P16-201ENST00000460269 1703 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 MTND5P1-201ENST00000445440 1375 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LMNB1P20700 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LMNB1P20700 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.06□□□□□ -1.6
LMNB1P20700 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LMNB1P20700 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.06□□□□□ -1.6
LMNB1P20700 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.06□□□□□ -1.6
LMNB1P20700 Y_RNA.28-201ENST00000362554 111 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 RNA5SP307-201ENST00000362863 116 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 Y_RNA.148-201ENST00000363557 117 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 Y_RNA.399-201ENST00000383955 105 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 Y_RNA.482-201ENST00000384377 111 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 U8.11-201ENST00000384699 133 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 U8.12-201ENST00000384701 133 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 MIR153-1-201ENST00000384914 90 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 AL360182.1-201ENST00000397433 468 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
LMNB1P20700 Y_RNA.646-201ENST00000410980 101 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.06□□□□□ -1.6
LMNB1P20700 AL590632.1-201ENST00000424289 371 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.06□□□□□ -1.6
LMNB1P20700 AF228730.2-201ENST00000438784 848 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.06□□□□□ -1.6
LMNB1P20700 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.06□□□□□ -1.6
LMNB1P20700 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.06□□□□□ -1.6
LMNB1P20700 U8.18-201ENST00000459285 133 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 AC104472.2-201ENST00000469035 601 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 RPS29P19-201ENST00000479709 171 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.06□□□□□ -1.6
LMNB1P20700 AC008694.2-201ENST00000517591 306 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 AC008489.1-201ENST00000524271 483 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 AC106782.4-201ENST00000568264 210 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 HMGB2P1-201ENST00000591146 634 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.06□□□□□ -1.6
LMNB1P20700 AL160290.3-201ENST00000604869 165 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 AC007938.3-201ENST00000604965 623 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 AC007998.5-201ENST00000622938 237 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.06□□□□□ -1.6
LMNB1P20700 U6.105-201ENST00000637379 88 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.06□□□□□ -1.6
LMNB1P20700 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.06□□□□□ -1.6
LMNB1P20700 MAPK10-372ENST00000641954 3413 ntBASIC5.06□□□□□ -1.6
LMNB1P20700 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
LMNB1P20700 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.06□□□□□ -1.6
LMNB1P20700 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LMNB1P20700 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMNB1P20700 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LMNB1P20700 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMNB1P20700 Y_RNA.112-201ENST00000363250 102 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 Y_RNA.133-201ENST00000363428 110 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 RNU6-574P-201ENST00000384265 107 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 MIR921-201ENST00000401133 56 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 AL356057.3-201ENST00000402607 340 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 SYF2P2-201ENST00000417620 583 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.05□□□□□ -1.6
LMNB1P20700 RPL7P37-201ENST00000425095 738 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 AP000907.1-201ENST00000428428 510 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.05□□□□□ -1.6
LMNB1P20700 NEFMP1-201ENST00000443423 1006 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms