Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 MIR215-201ENST00000384858 110 ntBASIC5.29□□□□□ -1.56
ATP4AP20648 MIR141-201ENST00000384975 95 ntBASIC5.29□□□□□ -1.56
ATP4AP20648 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ATP4AP20648 U3.42-201ENST00000408746 214 ntBASIC5.29□□□□□ -1.56
ATP4AP20648 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.29□□□□□ -1.56
ATP4AP20648 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.29□□□□□ -1.56
ATP4AP20648 RPL29P29-201ENST00000448725 423 ntBASIC5.29□□□□□ -1.56
ATP4AP20648 AC079168.2-201ENST00000453977 416 ntBASIC5.29□□□□□ -1.56
ATP4AP20648 RNU7-120P-201ENST00000459334 63 ntBASIC5.29□□□□□ -1.56
ATP4AP20648 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.29□□□□□ -1.56
ATP4AP20648 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.29□□□□□ -1.56
ATP4AP20648 HIGD1AP3-201ENST00000515857 278 ntBASIC5.29□□□□□ -1.56
ATP4AP20648 AC093023.1-201ENST00000547375 507 ntBASIC5.29□□□□□ -1.56
ATP4AP20648 AC010620.2-201ENST00000600135 313 ntBASIC5.29□□□□□ -1.56
ATP4AP20648 AL121917.1-203ENST00000605534 577 ntBASIC5.29□□□□□ -1.56
ATP4AP20648 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.29□□□□□ -1.56
ATP4AP20648 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.29□□□□□ -1.56
ATP4AP20648 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.29□□□□□ -1.56
ATP4AP20648 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATP4AP20648 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATP4AP20648 MTND5P9-201ENST00000503854 1755 ntBASIC5.29□□□□□ -1.56
ATP4AP20648 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ATP4AP20648 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
ATP4AP20648 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ATP4AP20648 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATP4AP20648 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATP4AP20648 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.28□□□□□ -1.56
ATP4AP20648 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
ATP4AP20648 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
ATP4AP20648 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATP4AP20648 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATP4AP20648 snoU2_19.2-201ENST00000363024 80 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 RNU6-595P-201ENST00000363944 107 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 Y_RNA.324-201ENST00000365165 102 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 MIR135A2-201ENST00000384854 100 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.28□□□□□ -1.56
ATP4AP20648 AL080315.1-201ENST00000406055 466 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATP4AP20648 ELOCP18-201ENST00000434209 337 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 AC092573.2-201ENST00000434546 243 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 TPT1P13-201ENST00000449760 499 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.28□□□□□ -1.56
ATP4AP20648 RNU6-1037P-201ENST00000459571 107 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 RNU1-6P-201ENST00000516290 144 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 RNU6-1338P-201ENST00000516328 91 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.28□□□□□ -1.56
ATP4AP20648 AP002392.1-201ENST00000537692 208 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 AP002770.2-201ENST00000543613 532 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 AL450472.3-201ENST00000615578 367 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 MIR6810-201ENST00000622701 70 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 MIR7641-1-201ENST00000627518 61 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 ZNF285B-201ENST00000561698 1767 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
ATP4AP20648 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATP4AP20648 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATP4AP20648 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
ATP4AP20648 AC000123.3-201ENST00000624029 4975 ntBASIC5.28□□□□□ -1.56
ATP4AP20648 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATP4AP20648 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.28□□□□□ -1.56
ATP4AP20648 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.27□□□□□ -1.57
ATP4AP20648 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATP4AP20648 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
ATP4AP20648 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
ATP4AP20648 SNORD113.2-201ENST00000364166 89 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 RNU6-1317P-201ENST00000364582 104 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 U3.13-201ENST00000364804 214 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 Y_RNA.439-201ENST00000384119 94 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 RNU6-708P-201ENST00000384217 107 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 Y_RNA.458-201ENST00000384240 102 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 SNORD115-46-201ENST00000390982 71 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 AL590762.2-201ENST00000395798 571 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 AL353621.1-201ENST00000418219 243 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 AC140479.3-201ENST00000418944 1126 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 AC091286.1-201ENST00000431233 461 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.27□□□□□ -1.57
ATP4AP20648 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 AC087190.1-201ENST00000484462 480 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 AC107032.1-201ENST00000485945 480 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.27□□□□□ -1.57
ATP4AP20648 AC008716.1-201ENST00000511084 513 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 AC074250.1-201ENST00000511117 192 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.27□□□□□ -1.57
ATP4AP20648 CBX3P4-201ENST00000538909 354 ntBASIC5.27□□□□□ -1.57
ATP4AP20648 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.27□□□□□ -1.57
ATP4AP20648 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
ATP4AP20648 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATP4AP20648 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATP4AP20648 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATP4AP20648 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATP4AP20648 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATP4AP20648 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
ATP4AP20648 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.26□□□□□ -1.57
ATP4AP20648 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.26□□□□□ -1.57
ATP4AP20648 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATP4AP20648 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATP4AP20648 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
ATP4AP20648 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.26□□□□□ -1.57
ATP4AP20648 AC007738.1-201ENST00000413892 348 ntBASIC5.26□□□□□ -1.57
ATP4AP20648 CYCSP33-201ENST00000414485 327 ntBASIC5.26□□□□□ -1.57
ATP4AP20648 AC063979.1-201ENST00000415539 377 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms