Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC103710.2-202ENST00000641454 2853 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 RNU6-263P-201ENST00000363811 107 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 RNU6-82P-201ENST00000363970 107 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 RNA5SP235-201ENST00000365411 114 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 RNA5SP283-201ENST00000365604 119 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 Y_RNA.414-201ENST00000384011 101 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 Y_RNA.419-201ENST00000384041 102 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 RNU6-356P-201ENST00000384140 107 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 Y_RNA.576-201ENST00000384781 102 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 RNU6-837P-201ENST00000391056 108 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AL139247.1-201ENST00000422768 325 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 MTND2P23-201ENST00000422990 651 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AC018630.2-202ENST00000422992 927 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 Y_RNA.632-201ENST00000459189 102 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AC108078.2-201ENST00000510750 236 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 RNU6-1095P-201ENST00000516148 108 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AP003072.1-201ENST00000531740 145 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AL034351.1-201ENST00000605288 668 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AC092807.2-201ENST00000609367 243 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 MAPK10-372ENST00000641954 3413 ntBASIC3.38□□□□□ -1.87
TNFRSF1BP20333 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.38□□□□□ -1.87
TNFRSF1BP20333 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 TPTE2P4-201ENST00000258589 1605 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 RNU6-1155P-201ENST00000363554 107 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 MIR30B-201ENST00000384850 88 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 MIR153-1-201ENST00000384914 90 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 AL359634.1-202ENST00000404721 284 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 RPL7L1P10-201ENST00000427790 463 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 CKS1BP5-201ENST00000434172 273 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 RPL7P42-201ENST00000481005 679 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 KLHL2P1-201ENST00000508691 521 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 AC104806.1-201ENST00000508720 308 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 RN7SKP122-201ENST00000515923 296 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 SNORA70.14-201ENST00000516205 110 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 RNA5SP164-201ENST00000516533 110 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 RANP3-201ENST00000530970 276 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 AC087499.8-201ENST00000578406 226 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 AL360085.1-201ENST00000604713 532 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 AC103710.3-201ENST00000608157 948 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 RNVU1-4-201ENST00000612985 164 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 AL713922.2-201ENST00000619384 716 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 AL357559.1-201ENST00000622228 274 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 AL732372.2-225ENST00000642124 456 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 TNPO1P3-201ENST00000436471 2662 ntBASIC3.37□□□□□ -1.87
TNFRSF1BP20333 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFRSF1BP20333 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms