Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AC009268.2-201ENST00000621925 457 ntBASIC2.56□□□□□ -2
CCDC130P13994 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.56□□□□□ -2
CCDC130P13994 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC130P13994 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC130P13994 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC130P13994 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.55□□□□□ -2
CCDC130P13994 MTCO2P8-201ENST00000412213 658 ntBASIC2.55□□□□□ -2
CCDC130P13994 MTND1P21-201ENST00000412991 285 ntBASIC2.55□□□□□ -2
CCDC130P13994 CR769767.1-201ENST00000436337 346 ntBASIC2.55□□□□□ -2
CCDC130P13994 RSU1P2-202ENST00000437884 485 ntBASIC2.55□□□□□ -2
CCDC130P13994 PIGFP3-201ENST00000441918 722 ntBASIC2.55□□□□□ -2
CCDC130P13994 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.55□□□□□ -2
CCDC130P13994 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.55□□□□□ -2
CCDC130P13994 RN7SL636P-201ENST00000497504 294 ntBASIC2.55□□□□□ -2
CCDC130P13994 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.55□□□□□ -2
CCDC130P13994 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.55□□□□□ -2
CCDC130P13994 RNA5SP402-201ENST00000517148 110 ntBASIC2.55□□□□□ -2
CCDC130P13994 RNU1-104P-201ENST00000517280 175 ntBASIC2.55□□□□□ -2
CCDC130P13994 AC021269.2-201ENST00000532318 330 ntBASIC2.55□□□□□ -2
CCDC130P13994 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.55□□□□□ -2
CCDC130P13994 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
CCDC130P13994 RPP40P2-201ENST00000603596 712 ntBASIC2.55□□□□□ -2
CCDC130P13994 HMGB1P24-202ENST00000615653 685 ntBASIC2.55□□□□□ -2
CCDC130P13994 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.55□□□□□ -2
CCDC130P13994 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.55□□□□□ -2
CCDC130P13994 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
CCDC130P13994 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC130P13994 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
CCDC130P13994 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC130P13994 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC130P13994 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.54□□□□□ -2
CCDC130P13994 SNORD114-30-201ENST00000364448 72 ntBASIC2.54□□□□□ -2
CCDC130P13994 RN7SKP226-201ENST00000364912 300 ntBASIC2.54□□□□□ -2
CCDC130P13994 RNU6-217P-201ENST00000384164 104 ntBASIC2.54□□□□□ -2
CCDC130P13994 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC130P13994 AL590084.2-201ENST00000401481 382 ntBASIC2.54□□□□□ -2
CCDC130P13994 RPS4XP7-201ENST00000406274 780 ntBASIC2.54□□□□□ -2
CCDC130P13994 RNU6-757P-201ENST00000410334 100 ntBASIC2.54□□□□□ -2
CCDC130P13994 TPT1P14-201ENST00000448018 505 ntBASIC2.54□□□□□ -2
CCDC130P13994 EEF1B2P7-201ENST00000451177 676 ntBASIC2.54□□□□□ -2
CCDC130P13994 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.54□□□□□ -2
CCDC130P13994 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.54□□□□□ -2
CCDC130P13994 AC026436.1-201ENST00000510537 270 ntBASIC2.54□□□□□ -2
CCDC130P13994 SCARNA17.1-201ENST00000516211 143 ntBASIC2.54□□□□□ -2
CCDC130P13994 SCARNA17.2-201ENST00000516334 143 ntBASIC2.54□□□□□ -2
CCDC130P13994 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.54□□□□□ -2
CCDC130P13994 AP003122.3-201ENST00000526316 255 ntBASIC2.54□□□□□ -2
CCDC130P13994 OR4R1P-201ENST00000529879 463 ntBASIC2.54□□□□□ -2
CCDC130P13994 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.54□□□□□ -2
CCDC130P13994 MIR3616-201ENST00000584070 92 ntBASIC2.54□□□□□ -2
CCDC130P13994 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.54□□□□□ -2
CCDC130P13994 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.54□□□□□ -2
CCDC130P13994 AL161729.4-201ENST00000604650 476 ntBASIC2.54□□□□□ -2
CCDC130P13994 MTND4LP5-201ENST00000605152 292 ntBASIC2.54□□□□□ -2
CCDC130P13994 AC103810.6-201ENST00000606708 136 ntBASIC2.54□□□□□ -2
CCDC130P13994 AC008498.1-201ENST00000613012 531 ntBASIC2.54□□□□□ -2
CCDC130P13994 SCARNA17.4-201ENST00000614296 143 ntBASIC2.54□□□□□ -2
CCDC130P13994 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.54□□□□□ -2
CCDC130P13994 AP000484.1-201ENST00000620067 1252 ntBASIC2.54□□□□□ -2
CCDC130P13994 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.54□□□□□ -2
CCDC130P13994 AC025034.2-201ENST00000623264 286 ntBASIC2.54□□□□□ -2
CCDC130P13994 MIR1291-201ENST00000627649 87 ntBASIC2.54□□□□□ -2
CCDC130P13994 MIR4275-201ENST00000636486 87 ntBASIC2.54□□□□□ -2
CCDC130P13994 MTND1P37-201ENST00000636562 264 ntBASIC2.54□□□□□ -2
CCDC130P13994 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.54□□□□□ -2
CCDC130P13994 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC130P13994 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC130P13994 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC130P13994 AC009902.3-201ENST00000606235 2172 ntBASIC2.53□□□□□ -2
CCDC130P13994 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
CCDC130P13994 DDX10P1-201ENST00000448545 1933 ntBASIC2.53□□□□□ -2
CCDC130P13994 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC130P13994 RNU6-853P-201ENST00000364306 107 ntBASIC2.53□□□□□ -2
CCDC130P13994 SNORA67.1-201ENST00000364749 141 ntBASIC2.53□□□□□ -2
CCDC130P13994 U8.8-201ENST00000365399 135 ntBASIC2.53□□□□□ -2
CCDC130P13994 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC130P13994 RNU6-925P-201ENST00000384629 104 ntBASIC2.53□□□□□ -2
CCDC130P13994 SNORA41-201ENST00000384675 132 ntBASIC2.53□□□□□ -2
CCDC130P13994 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.53□□□□□ -2
CCDC130P13994 AC007064.1-201ENST00000412238 351 ntBASIC2.53□□□□□ -2
CCDC130P13994 AL451054.2-201ENST00000420896 202 ntBASIC2.53□□□□□ -2
CCDC130P13994 ZNF863P-201ENST00000426746 417 ntBASIC2.53□□□□□ -2
CCDC130P13994 MYL8P-204ENST00000431574 518 ntBASIC2.53□□□□□ -2
CCDC130P13994 MTND3P1-201ENST00000441336 220 ntBASIC2.53□□□□□ -2
CCDC130P13994 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.53□□□□□ -2
CCDC130P13994 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.53□□□□□ -2
CCDC130P13994 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.53□□□□□ -2
CCDC130P13994 MRPS17P3-201ENST00000465453 385 ntBASIC2.53□□□□□ -2
CCDC130P13994 RPS15AP36-201ENST00000492022 382 ntBASIC2.53□□□□□ -2
CCDC130P13994 NDUFB4P2-201ENST00000509515 391 ntBASIC2.53□□□□□ -2
CCDC130P13994 AC093281.2-201ENST00000510153 597 ntBASIC2.53□□□□□ -2
CCDC130P13994 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.53□□□□□ -2
CCDC130P13994 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.53□□□□□ -2
CCDC130P13994 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.53□□□□□ -2
CCDC130P13994 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.53□□□□□ -2
CCDC130P13994 AC060771.1-201ENST00000582031 164 ntBASIC2.53□□□□□ -2
CCDC130P13994 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.53□□□□□ -2
CCDC130P13994 AL049779.4-201ENST00000604500 156 ntBASIC2.53□□□□□ -2
CCDC130P13994 AL136370.1-201ENST00000608166 691 ntBASIC2.53□□□□□ -2
CCDC130P13994 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms