Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.36□□□□□ -2.19
FREM3P0C091 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.36□□□□□ -2.19
FREM3P0C091 MTCYBP27-201ENST00000555160 670 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.36□□□□□ -2.19
FREM3P0C091 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
FREM3P0C091 DUXAP10-204ENST00000612052 616 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
FREM3P0C091 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
FREM3P0C091 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
FREM3P0C091 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.36□□□□□ -2.19
FREM3P0C091 AL359851.1-201ENST00000569460 4997 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
FREM3P0C091 TMSB4XP8-201ENST00000402089 135 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
FREM3P0C091 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.36□□□□□ -2.19
FREM3P0C091 AL445183.3-201ENST00000414168 502 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.36□□□□□ -2.19
FREM3P0C091 TMSB4XP6-201ENST00000415187 135 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 MTND4P24-201ENST00000424002 397 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 TMSB4XP1-201ENST00000424567 135 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 FGF7P5-201ENST00000441829 291 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.36□□□□□ -2.19
FREM3P0C091 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.36□□□□□ -2.19
FREM3P0C091 RPL32P14-201ENST00000463196 378 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 AC068781.1-201ENST00000488231 618 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 RPS15AP36-201ENST00000492022 382 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 RPL30P5-201ENST00000494923 336 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 AC023141.11-201ENST00000508864 202 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 TRMT112P2-201ENST00000512910 132 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.36□□□□□ -2.19
FREM3P0C091 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
FREM3P0C091 HMGN2P15-201ENST00000585707 270 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 AP001542.2-201ENST00000593141 364 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.36□□□□□ -2.19
FREM3P0C091 BX248123.2-201ENST00000606318 124 ntBASIC1.36□□□□□ -2.19
FREM3P0C091 AC103710.2-202ENST00000641454 2853 ntBASIC1.35□□□□□ -2.19
FREM3P0C091 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.35□□□□□ -2.19
FREM3P0C091 AC011477.1-204ENST00000623416 1325 ntBASIC1.35□□□□□ -2.19
FREM3P0C091 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.35□□□□□ -2.19
FREM3P0C091 Z82210.1-201ENST00000440037 231 ntBASIC1.35□□□□□ -2.19
FREM3P0C091 AC092170.1-201ENST00000440211 356 ntBASIC1.35□□□□□ -2.19
FREM3P0C091 AC092473.1-201ENST00000441098 221 ntBASIC1.35□□□□□ -2.19
FREM3P0C091 GPM6BP3-201ENST00000442797 145 ntBASIC1.35□□□□□ -2.19
FREM3P0C091 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
FREM3P0C091 PMCHL2-203ENST00000457791 237 ntBASIC1.35□□□□□ -2.19
FREM3P0C091 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.35□□□□□ -2.19
FREM3P0C091 RNU6-1256P-201ENST00000516539 103 ntBASIC1.35□□□□□ -2.19
FREM3P0C091 AC022662.1-201ENST00000580252 331 ntBASIC1.35□□□□□ -2.19
FREM3P0C091 MIR6504-201ENST00000613520 61 ntBASIC1.35□□□□□ -2.19
FREM3P0C091 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
FREM3P0C091 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
FREM3P0C091 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
FREM3P0C091 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
FREM3P0C091 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
FREM3P0C091 SNORA3A-201ENST00000364113 130 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 RNU6-392P-201ENST00000364926 101 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.34□□□□□ -2.19
FREM3P0C091 SNORA51.6-201ENST00000384151 125 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
FREM3P0C091 RNU6-220P-201ENST00000390919 107 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 AL121978.1-201ENST00000402778 359 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 HMGB1P9-201ENST00000429856 646 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 HMGB1P27-201ENST00000431429 603 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 MTATP6P7-201ENST00000453315 681 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 AC104685.1-201ENST00000502445 371 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.34□□□□□ -2.19
FREM3P0C091 AC104108.1-201ENST00000509930 412 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 AF131216.2-201ENST00000512316 564 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 AC019176.1-201ENST00000518519 225 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.34□□□□□ -2.19
FREM3P0C091 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.34□□□□□ -2.19
FREM3P0C091 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.34□□□□□ -2.19
FREM3P0C091 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 AL671309.1-201ENST00000603750 544 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 BNIP3P4-201ENST00000604946 565 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 AP005137.2-201ENST00000609238 400 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 RMST_6.1-201ENST00000611980 203 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 SDR42E1P2-201ENST00000614861 481 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 SDR42E1P4-201ENST00000620894 481 ntBASIC1.34□□□□□ -2.19
FREM3P0C091 GDI2P1-201ENST00000429312 1336 ntBASIC1.34□□□□□ -2.2
FREM3P0C091 U3.20-201ENST00000390909 217 ntBASIC1.34□□□□□ -2.2
FREM3P0C091 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
FREM3P0C091 PAICSP7-201ENST00000419829 962 ntBASIC1.34□□□□□ -2.2
FREM3P0C091 AC245517.4-201ENST00000448601 281 ntBASIC1.34□□□□□ -2.2
FREM3P0C091 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.34□□□□□ -2.2
FREM3P0C091 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.34□□□□□ -2.2
FREM3P0C091 RPL31P41-201ENST00000477967 372 ntBASIC1.34□□□□□ -2.2
FREM3P0C091 SNORA48.10-201ENST00000516965 160 ntBASIC1.34□□□□□ -2.2
FREM3P0C091 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.34□□□□□ -2.2
FREM3P0C091 CYCSP26-201ENST00000534107 320 ntBASIC1.34□□□□□ -2.2
FREM3P0C091 AC095057.3-201ENST00000567102 1157 ntBASIC1.34□□□□□ -2.2
FREM3P0C091 MIR5571-201ENST00000577998 113 ntBASIC1.34□□□□□ -2.2
FREM3P0C091 SNORD39.3-201ENST00000584451 71 ntBASIC1.34□□□□□ -2.2
FREM3P0C091 AC025588.2-201ENST00000604851 466 ntBASIC1.34□□□□□ -2.2
FREM3P0C091 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.34□□□□□ -2.2
FREM3P0C091 AL049641.1-201ENST00000441055 1948 ntBASIC1.34□□□□□ -2.2
FREM3P0C091 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
FREM3P0C091 AC006026.1-201ENST00000444025 1803 ntBASIC1.33□□□□□ -2.2
FREM3P0C091 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms