Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 PDCL2P1-201ENST00000419302 352 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.27□□□□□ -1.73
SNRPA1P09661 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.27□□□□□ -1.73
SNRPA1P09661 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.27□□□□□ -1.73
SNRPA1P09661 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 USP9YP7-201ENST00000436723 430 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 CBWD4P-201ENST00000445695 655 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 DDX3P2-201ENST00000446138 111 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 USP9YP32-201ENST00000452432 430 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 AL356010.1-201ENST00000456364 102 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 ST13P14-201ENST00000474095 734 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 AL163973.1-201ENST00000484753 577 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNRPA1P09661 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.27□□□□□ -1.73
SNRPA1P09661 TMEM248P1-201ENST00000510579 951 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 SNORD27.1-201ENST00000516319 72 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 PSMA2P1-201ENST00000526365 646 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 AC243972.3-201ENST00000539655 198 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.27□□□□□ -1.73
SNRPA1P09661 AC007424.1-203ENST00000554613 687 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 AL121576.1-201ENST00000556055 276 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNRPA1P09661 MIR4325-201ENST00000583049 90 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 AP001429.1-201ENST00000602568 530 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.27□□□□□ -1.73
SNRPA1P09661 AC006065.5-201ENST00000623427 349 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.27□□□□□ -1.73
SNRPA1P09661 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.27□□□□□ -1.73
SNRPA1P09661 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.27□□□□□ -1.73
SNRPA1P09661 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.27□□□□□ -1.73
SNRPA1P09661 AL513302.2-201ENST00000562313 1842 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.27□□□□□ -1.73
SNRPA1P09661 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.27□□□□□ -1.73
SNRPA1P09661 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNRPA1P09661 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNRPA1P09661 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNRPA1P09661 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNRPA1P09661 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNRPA1P09661 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNRPA1P09661 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.26□□□□□ -1.73
SNRPA1P09661 RNU4-48P-201ENST00000365559 182 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 MIR558-201ENST00000384920 94 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 RNU6-821P-201ENST00000390995 107 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 RNU6-332P-201ENST00000391193 108 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 AL162578.1-201ENST00000406202 378 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.26□□□□□ -1.73
SNRPA1P09661 AC005517.2-201ENST00000424673 553 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.26□□□□□ -1.73
SNRPA1P09661 MTATP6P16-201ENST00000434543 526 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 RPL29P29-201ENST00000448725 423 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 MTND1P9-201ENST00000453775 944 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 FGF7P3-201ENST00000454645 303 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.26□□□□□ -1.73
SNRPA1P09661 HMGB3P30-201ENST00000457863 606 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 HMGB1P25-201ENST00000468402 607 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.26□□□□□ -1.73
SNRPA1P09661 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.26□□□□□ -1.73
SNRPA1P09661 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.26□□□□□ -1.73
SNRPA1P09661 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.26□□□□□ -1.73
SNRPA1P09661 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNRPA1P09661 Y_RNA.675-201ENST00000516389 149 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 SNORD60.2-201ENST00000516883 86 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 HMGB1P41-201ENST00000520234 440 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNRPA1P09661 AC023050.3-201ENST00000541142 333 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.26□□□□□ -1.73
SNRPA1P09661 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.26□□□□□ -1.73
SNRPA1P09661 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.26□□□□□ -1.73
SNRPA1P09661 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.26□□□□□ -1.73
SNRPA1P09661 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.26□□□□□ -1.73
SNRPA1P09661 AL669831.4-202ENST00000590817 238 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.26□□□□□ -1.73
SNRPA1P09661 AC007742.2-201ENST00000618226 398 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 AL713922.2-201ENST00000619384 716 ntBASIC4.26□□□□□ -1.73
SNRPA1P09661 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNRPA1P09661 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SNRPA1P09661 OR4G1P-203ENST00000641984 1631 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNRPA1P09661 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNRPA1P09661 RNU6-511P-201ENST00000363496 107 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 RNA5SP322-201ENST00000363617 119 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 SNORD81.2-201ENST00000365153 76 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.25□□□□□ -1.73
SNRPA1P09661 RNU6-641P-201ENST00000384006 107 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 RNA5SP56-201ENST00000410277 118 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 RNU4-78P-201ENST00000410940 126 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.25□□□□□ -1.73
SNRPA1P09661 AC008850.1-201ENST00000427546 362 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.25□□□□□ -1.73
SNRPA1P09661 TAAR7P-201ENST00000436141 242 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 AC008264.1-201ENST00000447612 367 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 AC073415.1-201ENST00000449240 153 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.25□□□□□ -1.73
SNRPA1P09661 RPS29P15-201ENST00000458329 171 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 AP000873.1-201ENST00000463987 400 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 AC109925.1-201ENST00000478069 331 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 AC093278.1-201ENST00000494700 600 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.25□□□□□ -1.73
SNRPA1P09661 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.25□□□□□ -1.73
SNRPA1P09661 RN7SKP116-201ENST00000516902 319 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms