Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.87□□□□□ -2.27
SPTA1P02549 AL121769.1-201ENST00000469473 401 ntBASIC0.87□□□□□ -2.27
SPTA1P02549 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.87□□□□□ -2.27
SPTA1P02549 RNA5SP468-201ENST00000516782 93 ntBASIC0.87□□□□□ -2.27
SPTA1P02549 RNU6-711P-201ENST00000517255 106 ntBASIC0.87□□□□□ -2.27
SPTA1P02549 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.87□□□□□ -2.27
SPTA1P02549 MIR5194-201ENST00000582634 120 ntBASIC0.87□□□□□ -2.27
SPTA1P02549 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.87□□□□□ -2.27
SPTA1P02549 AC009812.4-201ENST00000569134 1805 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
SPTA1P02549 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SPTA1P02549 ARF4P4-201ENST00000439608 520 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 AL161651.1-201ENST00000440882 223 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 AC009296.1-201ENST00000443146 155 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 HMGN2P21-201ENST00000447764 270 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 RPS29P23-201ENST00000458635 123 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.86□□□□□ -2.27
SPTA1P02549 SNORA48.9-201ENST00000516419 162 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 AC109635.4-202ENST00000531666 412 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 AC009220.3-201ENST00000604318 586 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 AC110079.1-202ENST00000635213 138 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.86□□□□□ -2.27
SPTA1P02549 MIR524-201ENST00000385242 87 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 Z99497.1-201ENST00000421282 135 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 RAB9AP5-201ENST00000437794 597 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 RAB9AP2-201ENST00000443911 597 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.86□□□□□ -2.27
SPTA1P02549 RPL26P9-201ENST00000457466 433 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 RNA5SP310-201ENST00000459084 116 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 FO393415.2-201ENST00000480085 343 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SPTA1P02549 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.86□□□□□ -2.27
SPTA1P02549 RNU2-44P-201ENST00000516795 194 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 OR6C73P-201ENST00000546432 358 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 MIR4714-201ENST00000580728 77 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 AL161734.1-201ENST00000609720 557 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 MIR203B-201ENST00000636080 86 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 AC009902.3-201ENST00000606235 2172 ntBASIC0.86□□□□□ -2.27
SPTA1P02549 SNORA51.2-201ENST00000364595 132 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 RNU6-418P-201ENST00000384035 107 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 SNORD23.1-201ENST00000408212 104 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.85□□□□□ -2.27
SPTA1P02549 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.85□□□□□ -2.27
SPTA1P02549 RPS27P21-201ENST00000486977 252 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 SUB1P1-201ENST00000524415 382 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.85□□□□□ -2.27
SPTA1P02549 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.85□□□□□ -2.27
SPTA1P02549 SYF2P1-201ENST00000550658 413 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 MIR5589-201ENST00000579442 60 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SPTA1P02549 NACAP2-201ENST00000318548 624 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 MIR329-2-201ENST00000385029 84 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 SNORA46.1-201ENST00000391069 153 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 TXNP7-201ENST00000406296 293 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 RN7SKP51-201ENST00000410781 304 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 MTCO3P46-201ENST00000425787 232 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.85□□□□□ -2.27
SPTA1P02549 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.85□□□□□ -2.27
SPTA1P02549 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.85□□□□□ -2.27
SPTA1P02549 LDHBP3-201ENST00000514909 822 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 AP003497.1-201ENST00000528472 562 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 AP003717.3-201ENST00000544832 1180 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.85□□□□□ -2.27
SPTA1P02549 AC008749.1-201ENST00000597650 306 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.85□□□□□ -2.27
SPTA1P02549 AC092140.2-201ENST00000618027 521 ntBASIC0.85□□□□□ -2.27
SPTA1P02549 AC110491.1-201ENST00000562191 2010 ntBASIC0.84□□□□□ -2.27
SPTA1P02549 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
SPTA1P02549 SNORA67.1-201ENST00000364749 141 ntBASIC0.84□□□□□ -2.27
SPTA1P02549 RPS4XP3-201ENST00000398541 413 ntBASIC0.84□□□□□ -2.27
SPTA1P02549 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.84□□□□□ -2.27
SPTA1P02549 PRELID3BP4-201ENST00000515476 571 ntBASIC0.84□□□□□ -2.27
SPTA1P02549 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.84□□□□□ -2.27
SPTA1P02549 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.84□□□□□ -2.27
SPTA1P02549 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.84□□□□□ -2.27
SPTA1P02549 AL390240.1-201ENST00000612950 384 ntBASIC0.84□□□□□ -2.27
SPTA1P02549 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
SPTA1P02549 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.28
SPTA1P02549 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
SPTA1P02549 OR1L1-202ENST00000373686 1083 ntBASIC0.84□□□□□ -2.28
SPTA1P02549 RNA5SP252-201ENST00000391131 119 ntBASIC0.84□□□□□ -2.28
SPTA1P02549 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.84□□□□□ -2.28
SPTA1P02549 AC010285.1-201ENST00000470580 392 ntBASIC0.84□□□□□ -2.28
SPTA1P02549 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.84□□□□□ -2.28
SPTA1P02549 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.84□□□□□ -2.28
SPTA1P02549 NBEAP1-201ENST00000554452 979 ntBASIC0.84□□□□□ -2.28
SPTA1P02549 AC012443.1-201ENST00000605605 231 ntBASIC0.84□□□□□ -2.28
SPTA1P02549 AC079597.1-201ENST00000624306 508 ntBASIC0.84□□□□□ -2.28
SPTA1P02549 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
SPTA1P02549 MIR1265-201ENST00000408444 86 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 RNA5SP498-201ENST00000411342 120 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 AC008379.1-201ENST00000463655 464 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.83□□□□□ -2.28
SPTA1P02549 RN7SKP179-201ENST00000516126 217 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.83□□□□□ -2.28
SPTA1P02549 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.83□□□□□ -2.28
SPTA1P02549 AC107954.1-201ENST00000565906 727 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 AC093838.1-201ENST00000613014 469 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms