Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.59□□□□□ -2.15
COL4A1P02462 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.59□□□□□ -2.15
COL4A1P02462 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.59□□□□□ -2.15
COL4A1P02462 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.59□□□□□ -2.15
COL4A1P02462 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.59□□□□□ -2.15
COL4A1P02462 RPS20P24-201ENST00000457473 361 ntBASIC1.59□□□□□ -2.15
COL4A1P02462 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.59□□□□□ -2.15
COL4A1P02462 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.59□□□□□ -2.15
COL4A1P02462 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
COL4A1P02462 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
COL4A1P02462 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
COL4A1P02462 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
COL4A1P02462 AP003355.1-201ENST00000518956 587 ntBASIC1.59□□□□□ -2.15
COL4A1P02462 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
COL4A1P02462 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.59□□□□□ -2.15
COL4A1P02462 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.59□□□□□ -2.15
COL4A1P02462 AC023824.3-201ENST00000569003 562 ntBASIC1.59□□□□□ -2.15
COL4A1P02462 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
COL4A1P02462 AC090330.1-201ENST00000588646 764 ntBASIC1.59□□□□□ -2.15
COL4A1P02462 AC068620.3-201ENST00000602749 560 ntBASIC1.59□□□□□ -2.15
COL4A1P02462 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.59□□□□□ -2.15
COL4A1P02462 AL583856.2-201ENST00000606298 543 ntBASIC1.59□□□□□ -2.15
COL4A1P02462 AL512506.2-201ENST00000624472 458 ntBASIC1.59□□□□□ -2.15
COL4A1P02462 AC135776.4-201ENST00000624300 1904 ntBASIC1.59□□□□□ -2.16
COL4A1P02462 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL4A1P02462 RNU6-619P-201ENST00000365146 108 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
COL4A1P02462 RNU6-1080P-201ENST00000383982 107 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 SNORA40.4-201ENST00000390971 128 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AC074117.2-201ENST00000417130 397 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.58□□□□□ -2.16
COL4A1P02462 AC241584.1-201ENST00000438469 1241 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AC007395.1-201ENST00000451333 677 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AC104073.1-201ENST00000451988 151 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AC092155.2-201ENST00000454675 477 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.58□□□□□ -2.16
COL4A1P02462 AC087879.1-201ENST00000474343 374 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 MTCO3P35-201ENST00000485582 781 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 ARL2BPP4-201ENST00000506854 471 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AC093281.2-201ENST00000510153 597 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AC016065.2-201ENST00000514530 444 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 RNU5A-7P-201ENST00000515979 116 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A1P02462 AC090821.2-201ENST00000523552 176 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.58□□□□□ -2.16
COL4A1P02462 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A1P02462 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A1P02462 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
COL4A1P02462 AC090616.5-202ENST00000582111 297 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AC097504.2-201ENST00000608088 454 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.58□□□□□ -2.16
COL4A1P02462 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.58□□□□□ -2.16
COL4A1P02462 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.58□□□□□ -2.16
COL4A1P02462 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.58□□□□□ -2.16
COL4A1P02462 RNU6-263P-201ENST00000363811 107 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 SNORA67.1-201ENST00000364749 141 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 RNU6-609P-201ENST00000365459 107 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 DEFB109C-201ENST00000382575 264 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 DEFB109B-201ENST00000382656 264 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 MIR649-201ENST00000384843 97 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AL356057.2-201ENST00000403318 432 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AL355615.1-201ENST00000406187 641 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 RPS3AP44-201ENST00000425466 790 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AC013262.1-201ENST00000426710 252 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 MTCYBP15-201ENST00000433123 1127 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
COL4A1P02462 AL096829.2-201ENST00000446582 742 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AL050341.1-201ENST00000447743 313 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.58□□□□□ -2.16
COL4A1P02462 MTCO3P2-201ENST00000457365 171 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 BZW1P2-201ENST00000473537 826 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A1P02462 AC004062.1-201ENST00000509926 645 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 MTCO3P27-201ENST00000514397 196 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 RNU6-467P-201ENST00000517027 110 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 IGJP1-201ENST00000522682 475 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AC090502.2-201ENST00000549267 280 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.58□□□□□ -2.16
COL4A1P02462 AL445435.1-201ENST00000604232 665 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 MIR6078-201ENST00000611069 100 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 AC093875.1-201ENST00000623688 504 ntBASIC1.58□□□□□ -2.16
COL4A1P02462 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL4A1P02462 AC130650.2-201ENST00000618736 2403 ntBASIC1.57□□□□□ -2.16
COL4A1P02462 Y_RNA.354-201ENST00000365448 111 ntBASIC1.57□□□□□ -2.16
COL4A1P02462 AL121978.1-201ENST00000402778 359 ntBASIC1.57□□□□□ -2.16
COL4A1P02462 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.57□□□□□ -2.16
COL4A1P02462 UBE2V1P13-201ENST00000436983 439 ntBASIC1.57□□□□□ -2.16
COL4A1P02462 FO393415.2-201ENST00000480085 343 ntBASIC1.57□□□□□ -2.16
COL4A1P02462 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.57□□□□□ -2.16
COL4A1P02462 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.57□□□□□ -2.16
COL4A1P02462 AC113155.1-201ENST00000511141 769 ntBASIC1.57□□□□□ -2.16
COL4A1P02462 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.57□□□□□ -2.16
COL4A1P02462 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.57□□□□□ -2.16
COL4A1P02462 SNORA31.8-201ENST00000516327 108 ntBASIC1.57□□□□□ -2.16
COL4A1P02462 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.57□□□□□ -2.16
COL4A1P02462 MTCO1P47-201ENST00000523889 1271 ntBASIC1.57□□□□□ -2.16
COL4A1P02462 OR4R1P-201ENST00000529879 463 ntBASIC1.57□□□□□ -2.16
COL4A1P02462 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms