Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 OR51A5P-201ENST00000415429 942 ntBASIC3.3□□□□□ -1.88
LDLRP01130 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.3□□□□□ -1.88
LDLRP01130 BX842559.1-201ENST00000419615 532 ntBASIC3.3□□□□□ -1.88
LDLRP01130 BX890604.2-201ENST00000427883 474 ntBASIC3.3□□□□□ -1.88
LDLRP01130 AC005300.1-201ENST00000428401 373 ntBASIC3.3□□□□□ -1.88
LDLRP01130 AC005019.1-201ENST00000436455 431 ntBASIC3.3□□□□□ -1.88
LDLRP01130 RPL23AP22-201ENST00000437556 453 ntBASIC3.3□□□□□ -1.88
LDLRP01130 MTATP6P30-201ENST00000443540 664 ntBASIC3.3□□□□□ -1.88
LDLRP01130 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.3□□□□□ -1.88
LDLRP01130 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.3□□□□□ -1.88
LDLRP01130 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.3□□□□□ -1.88
LDLRP01130 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.3□□□□□ -1.88
LDLRP01130 RPL23AP31-201ENST00000456160 467 ntBASIC3.3□□□□□ -1.88
LDLRP01130 RPL23AP41-201ENST00000484754 458 ntBASIC3.3□□□□□ -1.88
LDLRP01130 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.3□□□□□ -1.88
LDLRP01130 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.3□□□□□ -1.88
LDLRP01130 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.3□□□□□ -1.88
LDLRP01130 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.3□□□□□ -1.88
LDLRP01130 AP003467.2-201ENST00000520175 319 ntBASIC3.3□□□□□ -1.88
LDLRP01130 AC107934.1-201ENST00000522215 217 ntBASIC3.3□□□□□ -1.88
LDLRP01130 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LDLRP01130 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LDLRP01130 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.3□□□□□ -1.88
LDLRP01130 RAB11AP2-201ENST00000545905 639 ntBASIC3.3□□□□□ -1.88
LDLRP01130 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.3□□□□□ -1.88
LDLRP01130 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.3□□□□□ -1.88
LDLRP01130 AC006504.3-201ENST00000586818 523 ntBASIC3.3□□□□□ -1.88
LDLRP01130 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.3□□□□□ -1.88
LDLRP01130 CKS1BP3-201ENST00000600888 237 ntBASIC3.3□□□□□ -1.88
LDLRP01130 AL117336.2-201ENST00000602435 335 ntBASIC3.3□□□□□ -1.88
LDLRP01130 RNU6-87P-201ENST00000607561 108 ntBASIC3.3□□□□□ -1.88
LDLRP01130 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.3□□□□□ -1.88
LDLRP01130 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
LDLRP01130 AL158209.2-201ENST00000619266 216 ntBASIC3.3□□□□□ -1.88
LDLRP01130 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.3□□□□□ -1.88
LDLRP01130 AL360181.4-201ENST00000621752 134 ntBASIC3.3□□□□□ -1.88
LDLRP01130 AC110994.2-201ENST00000635481 492 ntBASIC3.3□□□□□ -1.88
LDLRP01130 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.3□□□□□ -1.88
LDLRP01130 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.3□□□□□ -1.88
LDLRP01130 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LDLRP01130 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LDLRP01130 AL138713.1-201ENST00000624026 2130 ntBASIC3.29□□□□□ -1.88
LDLRP01130 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LDLRP01130 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.29□□□□□ -1.88
LDLRP01130 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LDLRP01130 RNU6-50P-201ENST00000362356 103 ntBASIC3.29□□□□□ -1.88
LDLRP01130 Y_RNA.11-201ENST00000362375 109 ntBASIC3.29□□□□□ -1.88
LDLRP01130 SNORD9-201ENST00000362566 104 ntBASIC3.29□□□□□ -1.88
LDLRP01130 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LDLRP01130 U3.19-201ENST00000390893 196 ntBASIC3.29□□□□□ -1.88
LDLRP01130 RNU6-780P-201ENST00000391030 104 ntBASIC3.29□□□□□ -1.88
LDLRP01130 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LDLRP01130 RPS3AP36-201ENST00000398190 775 ntBASIC3.29□□□□□ -1.88
LDLRP01130 CALM2P3-201ENST00000400429 449 ntBASIC3.29□□□□□ -1.88
LDLRP01130 MRPL42P2-201ENST00000403169 426 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AL590002.1-201ENST00000406554 418 ntBASIC3.29□□□□□ -1.88
LDLRP01130 RNU6-195P-201ENST00000411352 109 ntBASIC3.29□□□□□ -1.88
LDLRP01130 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LDLRP01130 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.29□□□□□ -1.88
LDLRP01130 UBE2FP1-201ENST00000416536 447 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AC245054.1-201ENST00000420944 258 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AL589872.1-201ENST00000426602 288 ntBASIC3.29□□□□□ -1.88
LDLRP01130 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.29□□□□□ -1.88
LDLRP01130 AC090774.1-201ENST00000435925 246 ntBASIC3.29□□□□□ -1.88
LDLRP01130 PGBD4P3-201ENST00000440731 581 ntBASIC3.29□□□□□ -1.88
LDLRP01130 MTND4LP16-201ENST00000440828 295 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.29□□□□□ -1.88
LDLRP01130 MTND6P13-201ENST00000443510 523 ntBASIC3.29□□□□□ -1.88
LDLRP01130 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.29□□□□□ -1.88
LDLRP01130 PSPHP1-201ENST00000450062 261 ntBASIC3.29□□□□□ -1.88
LDLRP01130 RBMY2UP-201ENST00000453474 324 ntBASIC3.29□□□□□ -1.88
LDLRP01130 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.29□□□□□ -1.88
LDLRP01130 AC023598.1-201ENST00000472521 361 ntBASIC3.29□□□□□ -1.88
LDLRP01130 RPS15AP36-201ENST00000492022 382 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AC091951.2-201ENST00000500762 203 ntBASIC3.29□□□□□ -1.88
LDLRP01130 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.29□□□□□ -1.88
LDLRP01130 VN1R104P-201ENST00000505115 1009 ntBASIC3.29□□□□□ -1.88
LDLRP01130 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LDLRP01130 HMGN1P28-201ENST00000521340 364 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AC104027.1-201ENST00000521887 300 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.29□□□□□ -1.88
LDLRP01130 AP000857.1-201ENST00000532151 543 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AK6P1-201ENST00000540219 478 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.29□□□□□ -1.88
LDLRP01130 AL133153.1-201ENST00000557756 303 ntBASIC3.29□□□□□ -1.88
LDLRP01130 MIR3146-201ENST00000580367 79 ntBASIC3.29□□□□□ -1.88
LDLRP01130 MIR3118-1-201ENST00000581787 76 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AC005730.3-201ENST00000583067 366 ntBASIC3.29□□□□□ -1.88
LDLRP01130 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.29□□□□□ -1.88
LDLRP01130 AC090578.1-201ENST00000604955 591 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AC012443.1-201ENST00000605605 231 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AC004908.2-201ENST00000609090 574 ntBASIC3.29□□□□□ -1.88
LDLRP01130 BX664608.1-201ENST00000610519 487 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AL390240.1-201ENST00000612950 384 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AL355810.1-201ENST00000614629 552 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AC002553.4-201ENST00000616896 331 ntBASIC3.29□□□□□ -1.88
LDLRP01130 MIR6130-201ENST00000619419 109 ntBASIC3.29□□□□□ -1.88
LDLRP01130 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.29□□□□□ -1.88
LDLRP01130 AC091953.2-201ENST00000623979 160 ntBASIC3.29□□□□□ -1.88
LDLRP01130 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 289.5 ms