Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MIR135A2-201ENST00000384854 100 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 NDUFS5P1-201ENST00000405668 289 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 AL445189.1-201ENST00000405722 338 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 Y_RNA.594-201ENST00000410373 140 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 RN7SKP27-201ENST00000410684 333 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.14□□□□□ -1.75
CNOT4O95628 AC004866.2-201ENST00000438285 481 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 FABP5P13-201ENST00000452144 328 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 AC079168.2-201ENST00000453977 416 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 AC008481.1-201ENST00000463278 396 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 Y_RNA.670-201ENST00000516255 105 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 RNU6-635P-201ENST00000516651 102 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.14□□□□□ -1.75
CNOT4O95628 SYF2P1-201ENST00000550658 413 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.14□□□□□ -1.75
CNOT4O95628 AC093249.4-201ENST00000564755 259 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 RPL23AP84-201ENST00000571193 464 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 AC018462.2-201ENST00000605375 395 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNOT4O95628 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNOT4O95628 CDC27P3-201ENST00000635418 1910 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNOT4O95628 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNOT4O95628 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.14□□□□□ -1.75
CNOT4O95628 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.14□□□□□ -1.75
CNOT4O95628 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNOT4O95628 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNOT4O95628 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.14□□□□□ -1.75
CNOT4O95628 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNOT4O95628 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNOT4O95628 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.14□□□□□ -1.75
CNOT4O95628 AL137003.2-201ENST00000606924 2538 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.13□□□□□ -1.75
CNOT4O95628 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CNOT4O95628 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CNOT4O95628 AL136164.3-201ENST00000624429 3978 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CNOT4O95628 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CNOT4O95628 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CNOT4O95628 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CNOT4O95628 AL590240.1-201ENST00000334118 313 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 RNU6-490P-201ENST00000362985 107 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 SNORD113.2-201ENST00000364166 89 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 SNORA63.7-201ENST00000365579 123 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CNOT4O95628 Y_RNA.473-201ENST00000384333 102 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 Y_RNA.496-201ENST00000384444 101 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 RNU6-882P-201ENST00000391025 103 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 U3.22-201ENST00000391120 215 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 SSXP9-201ENST00000417503 292 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.13□□□□□ -1.75
CNOT4O95628 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.13□□□□□ -1.75
CNOT4O95628 AL590632.1-201ENST00000424289 371 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 AC008267.5-201ENST00000424928 265 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 MTCO1P39-201ENST00000426148 480 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 AC236972.1-201ENST00000433225 199 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.13□□□□□ -1.75
CNOT4O95628 HMGN2P16-201ENST00000456802 261 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 RPL36AP41-201ENST00000493820 306 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 AC110794.1-201ENST00000505816 425 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.13□□□□□ -1.75
CNOT4O95628 RNU6-1332P-201ENST00000516666 104 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 RNU6-699P-201ENST00000517081 110 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.13□□□□□ -1.75
CNOT4O95628 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.13□□□□□ -1.75
CNOT4O95628 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.13□□□□□ -1.75
CNOT4O95628 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.13□□□□□ -1.75
CNOT4O95628 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.13□□□□□ -1.75
CNOT4O95628 MIR1254-2-201ENST00000579553 63 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 AC113195.1-201ENST00000579952 141 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 AL356218.2-201ENST00000605264 187 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.13□□□□□ -1.75
CNOT4O95628 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.13□□□□□ -1.75
CNOT4O95628 AC108751.5-201ENST00000492880 1336 ntBASIC4.13□□□□□ -1.75
CNOT4O95628 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CNOT4O95628 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CNOT4O95628 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CNOT4O95628 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.13□□□□□ -1.75
CNOT4O95628 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CNOT4O95628 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CNOT4O95628 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CNOT4O95628 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.12□□□□□ -1.75
CNOT4O95628 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNOT4O95628 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNOT4O95628 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNOT4O95628 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNOT4O95628 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CNOT4O95628 Y_RNA.153-201ENST00000363615 91 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 RNU6-434P-201ENST00000384376 107 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 RNU1-82P-201ENST00000390851 165 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 MIR1193-201ENST00000408109 78 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 RPL21P109-201ENST00000422213 475 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 DPH3P2-201ENST00000422618 250 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 RPL7P37-201ENST00000425095 738 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.12□□□□□ -1.75
CNOT4O95628 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.12□□□□□ -1.75
CNOT4O95628 MTCO3P45-201ENST00000443036 613 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 GAPDHP27-201ENST00000447427 1020 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 AL162389.1-201ENST00000449233 177 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms