Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
LTN1O94822 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.31□□□□□ -2.2
LTN1O94822 SNORA31.16-201ENST00000516773 139 ntBASIC1.31□□□□□ -2.2
LTN1O94822 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.31□□□□□ -2.2
LTN1O94822 CBX3P8-201ENST00000532412 525 ntBASIC1.31□□□□□ -2.2
LTN1O94822 CBX3P7-201ENST00000532876 502 ntBASIC1.31□□□□□ -2.2
LTN1O94822 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.31□□□□□ -2.2
LTN1O94822 AL050343.2-201ENST00000607338 280 ntBASIC1.31□□□□□ -2.2
LTN1O94822 AC092140.2-201ENST00000618027 521 ntBASIC1.31□□□□□ -2.2
LTN1O94822 AC139769.3-201ENST00000618383 175 ntBASIC1.31□□□□□ -2.2
LTN1O94822 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
LTN1O94822 AL137003.2-201ENST00000606924 2538 ntBASIC1.3□□□□□ -2.2
LTN1O94822 RNA5SP257-201ENST00000363023 116 ntBASIC1.3□□□□□ -2.2
LTN1O94822 RNA5SP62-201ENST00000363457 110 ntBASIC1.3□□□□□ -2.2
LTN1O94822 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
LTN1O94822 Y_RNA.393-201ENST00000383936 102 ntBASIC1.3□□□□□ -2.2
LTN1O94822 MIR625-201ENST00000385047 85 ntBASIC1.3□□□□□ -2.2
LTN1O94822 AC068050.1-201ENST00000394891 380 ntBASIC1.3□□□□□ -2.2
LTN1O94822 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.3□□□□□ -2.2
LTN1O94822 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.3□□□□□ -2.2
LTN1O94822 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.3□□□□□ -2.2
LTN1O94822 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.3□□□□□ -2.2
LTN1O94822 AL121769.1-201ENST00000469473 401 ntBASIC1.3□□□□□ -2.2
LTN1O94822 RNU6-928P-201ENST00000516876 104 ntBASIC1.3□□□□□ -2.2
LTN1O94822 CR383656.8-201ENST00000549046 145 ntBASIC1.3□□□□□ -2.2
LTN1O94822 MIR3973-201ENST00000579824 107 ntBASIC1.3□□□□□ -2.2
LTN1O94822 AC243773.3-201ENST00000613270 256 ntBASIC1.3□□□□□ -2.2
LTN1O94822 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
LTN1O94822 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
LTN1O94822 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.3□□□□□ -2.2
LTN1O94822 MIR676-201ENST00000390702 67 ntBASIC1.29□□□□□ -2.2
LTN1O94822 RNU6-882P-201ENST00000391025 103 ntBASIC1.29□□□□□ -2.2
LTN1O94822 AC004022.2-201ENST00000413824 193 ntBASIC1.29□□□□□ -2.2
LTN1O94822 AL591704.2-201ENST00000421658 181 ntBASIC1.29□□□□□ -2.2
LTN1O94822 AC005534.2-201ENST00000431047 433 ntBASIC1.29□□□□□ -2.2
LTN1O94822 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
LTN1O94822 AC104108.1-201ENST00000509930 412 ntBASIC1.29□□□□□ -2.2
LTN1O94822 AC108120.2-201ENST00000512973 294 ntBASIC1.29□□□□□ -2.2
LTN1O94822 RNU2-19P-201ENST00000517288 84 ntBASIC1.29□□□□□ -2.2
LTN1O94822 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.29□□□□□ -2.2
LTN1O94822 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.29□□□□□ -2.2
LTN1O94822 AC069304.3-201ENST00000603938 1084 ntBASIC1.29□□□□□ -2.2
LTN1O94822 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.29□□□□□ -2.2
LTN1O94822 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.29□□□□□ -2.2
LTN1O94822 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.29□□□□□ -2.2
LTN1O94822 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.29□□□□□ -2.2
LTN1O94822 AC091812.1-201ENST00000432235 1948 ntBASIC1.29□□□□□ -2.2
LTN1O94822 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
LTN1O94822 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.29□□□□□ -2.2
LTN1O94822 RNU11-5P-201ENST00000391216 129 ntBASIC1.29□□□□□ -2.2
LTN1O94822 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.29□□□□□ -2.2
LTN1O94822 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.29□□□□□ -2.2
LTN1O94822 SYPL1P1-201ENST00000473622 768 ntBASIC1.29□□□□□ -2.2
LTN1O94822 AC021382.1-201ENST00000483523 359 ntBASIC1.29□□□□□ -2.2
LTN1O94822 OR9N1P-202ENST00000494289 481 ntBASIC1.29□□□□□ -2.2
LTN1O94822 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.29□□□□□ -2.2
LTN1O94822 MTCYBP23-201ENST00000558717 1102 ntBASIC1.29□□□□□ -2.2
LTN1O94822 DPRXP5-201ENST00000604662 539 ntBASIC1.29□□□□□ -2.2
LTN1O94822 AC012443.1-201ENST00000605605 231 ntBASIC1.29□□□□□ -2.2
LTN1O94822 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.29□□□□□ -2.2
LTN1O94822 RNU6-1331P-201ENST00000363658 106 ntBASIC1.28□□□□□ -2.2
LTN1O94822 SNORA16B-201ENST00000364674 135 ntBASIC1.28□□□□□ -2.2
LTN1O94822 RNU6-716P-201ENST00000365621 103 ntBASIC1.28□□□□□ -2.2
LTN1O94822 HNRNPDP2-201ENST00000406475 478 ntBASIC1.28□□□□□ -2.2
LTN1O94822 MTCYBP34-201ENST00000439552 670 ntBASIC1.28□□□□□ -2.2
LTN1O94822 RNA5SP310-201ENST00000459084 116 ntBASIC1.28□□□□□ -2.2
LTN1O94822 AC055731.1-201ENST00000474387 401 ntBASIC1.28□□□□□ -2.2
LTN1O94822 AC015908.1-201ENST00000478739 476 ntBASIC1.28□□□□□ -2.2
LTN1O94822 EIF4EP3-201ENST00000498782 656 ntBASIC1.28□□□□□ -2.2
LTN1O94822 AP004371.1-201ENST00000525240 214 ntBASIC1.28□□□□□ -2.2
LTN1O94822 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.28□□□□□ -2.2
LTN1O94822 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.28□□□□□ -2.21
LTN1O94822 AC008669.1-201ENST00000565823 2178 ntBASIC1.27□□□□□ -2.21
LTN1O94822 SNORA68.1-201ENST00000364537 132 ntBASIC1.27□□□□□ -2.21
LTN1O94822 RNU6-317P-201ENST00000384031 107 ntBASIC1.27□□□□□ -2.21
LTN1O94822 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.27□□□□□ -2.21
LTN1O94822 AL133384.1-201ENST00000412744 351 ntBASIC1.27□□□□□ -2.21
LTN1O94822 UBE2D3P2-201ENST00000424409 445 ntBASIC1.27□□□□□ -2.21
LTN1O94822 AL596276.1-201ENST00000434465 418 ntBASIC1.27□□□□□ -2.21
LTN1O94822 PCNAP1-201ENST00000505363 709 ntBASIC1.27□□□□□ -2.21
LTN1O94822 AC096745.1-201ENST00000509945 370 ntBASIC1.27□□□□□ -2.21
LTN1O94822 SNORA31.25-201ENST00000517242 134 ntBASIC1.27□□□□□ -2.21
LTN1O94822 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.27□□□□□ -2.21
LTN1O94822 MIR4698-201ENST00000577795 80 ntBASIC1.27□□□□□ -2.21
LTN1O94822 AC084373.1-201ENST00000603311 235 ntBASIC1.27□□□□□ -2.21
LTN1O94822 AC103810.9-201ENST00000606688 112 ntBASIC1.27□□□□□ -2.21
LTN1O94822 AL442644.1-201ENST00000454390 3105 ntBASIC1.27□□□□□ -2.21
LTN1O94822 AC025263.3-201ENST00000622965 1396 ntBASIC1.27□□□□□ -2.21
LTN1O94822 VN1R36P-201ENST00000414936 291 ntBASIC1.26□□□□□ -2.21
LTN1O94822 AC092648.1-201ENST00000425870 423 ntBASIC1.26□□□□□ -2.21
LTN1O94822 RPL30P4-201ENST00000429309 333 ntBASIC1.26□□□□□ -2.21
LTN1O94822 AC087884.1-201ENST00000469738 328 ntBASIC1.26□□□□□ -2.21
LTN1O94822 HMGB1P22-201ENST00000505315 124 ntBASIC1.26□□□□□ -2.21
LTN1O94822 AC091965.2-201ENST00000512324 613 ntBASIC1.26□□□□□ -2.21
LTN1O94822 SNORA31.8-201ENST00000516327 108 ntBASIC1.26□□□□□ -2.21
LTN1O94822 CYP3A137P-201ENST00000562436 69 ntBASIC1.26□□□□□ -2.21
LTN1O94822 Y_RNA.251-201ENST00000364551 99 ntBASIC1.26□□□□□ -2.21
LTN1O94822 RPS4XP3-201ENST00000398541 413 ntBASIC1.26□□□□□ -2.21
LTN1O94822 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.26□□□□□ -2.21
LTN1O94822 MTCO3P46-201ENST00000425787 232 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms