Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 RNU6-89P-201ENST00000606519 100 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 Y_RNA.812-201ENST00000610788 101 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 Y_RNA.784-201ENST00000613803 101 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 Y_RNA.787-201ENST00000616522 101 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 Y_RNA.780-201ENST00000617336 101 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 Y_RNA.801-201ENST00000619005 101 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.11□□□□□ -1.75
CDKL5O76039 AC022149.2-201ENST00000621061 203 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 AC002550.2-201ENST00000621246 394 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.11□□□□□ -1.75
CDKL5O76039 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.11□□□□□ -1.75
CDKL5O76039 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.11□□□□□ -1.75
CDKL5O76039 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.11□□□□□ -1.75
CDKL5O76039 AC004972.1-201ENST00000623934 2209 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
CDKL5O76039 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDKL5O76039 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDKL5O76039 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.1□□□□□ -1.75
CDKL5O76039 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.1□□□□□ -1.75
CDKL5O76039 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL5O76039 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL5O76039 MFSD8-236ENST00000641509 4050 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 RNU6-511P-201ENST00000363496 107 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 SNORA62.1-201ENST00000364287 154 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 RNVU1-3-201ENST00000364313 161 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CDKL5O76039 AL590004.1-201ENST00000405321 300 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 USP9YP20-201ENST00000419224 558 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.1□□□□□ -1.75
CDKL5O76039 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.1□□□□□ -1.75
CDKL5O76039 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.1□□□□□ -1.75
CDKL5O76039 MTCO2P12-201ENST00000427426 682 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 AL158071.1-201ENST00000430315 461 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.1□□□□□ -1.75
CDKL5O76039 AL357552.1-201ENST00000445254 415 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.1□□□□□ -1.75
CDKL5O76039 SNORD108-201ENST00000459332 71 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 RNU6-329P-201ENST00000459618 107 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.1□□□□□ -1.75
CDKL5O76039 AC017037.2-201ENST00000513850 890 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 AC105417.1-201ENST00000514691 285 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 RN7SKP219-201ENST00000516825 296 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 RNU6-798P-201ENST00000516912 103 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.1□□□□□ -1.75
CDKL5O76039 AC011979.2-201ENST00000527568 352 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 AP005435.4-201ENST00000529514 284 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 OR5B10P-201ENST00000532869 642 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.1□□□□□ -1.75
CDKL5O76039 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.1□□□□□ -1.75
CDKL5O76039 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 AC010680.4-201ENST00000605334 543 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 RNVU1-4-201ENST00000612985 164 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 AC091925.2-201ENST00000625059 256 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.1□□□□□ -1.75
CDKL5O76039 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.1□□□□□ -1.75
CDKL5O76039 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL5O76039 AF127577.6-201ENST00000623352 2191 ntBASIC4.1□□□□□ -1.75
CDKL5O76039 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.1□□□□□ -1.75
CDKL5O76039 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CDKL5O76039 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDKL5O76039 ZNF826P-207ENST00000622273 1910 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDKL5O76039 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDKL5O76039 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.09□□□□□ -1.75
CDKL5O76039 AL359837.1-201ENST00000381357 287 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL5O76039 MED13P1-201ENST00000428342 171 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 CYCSP4-201ENST00000429682 331 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL5O76039 ERLEC1P1-201ENST00000433806 578 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 HMGB1P18-201ENST00000438801 619 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 Z95327.1-201ENST00000446082 482 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL5O76039 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL5O76039 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDKL5O76039 AC092436.1-201ENST00000506450 503 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 TTC39CP1-201ENST00000512513 755 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL5O76039 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.09□□□□□ -1.75
CDKL5O76039 Y_RNA.665-201ENST00000516177 98 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 SNORA70.19-201ENST00000516717 90 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 AP005597.4-201ENST00000526762 229 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 AP000857.1-201ENST00000532151 543 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 AL133271.1-201ENST00000538229 291 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 BNIP3P6-201ENST00000549284 499 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 PSMA3P-201ENST00000555485 635 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 AC026464.5-201ENST00000562497 722 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL5O76039 AC007566.2-201ENST00000603642 413 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 AC004908.2-201ENST00000609090 574 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL5O76039 AL121772.2-201ENST00000614331 297 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 XIST_intron.1-201ENST00000619444 68 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 AC244100.1-202ENST00000621554 382 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 AL136313.1-201ENST00000624804 202 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL5O76039 GABPAP-201ENST00000419271 1356 ntBASIC4.09□□□□□ -1.75
CDKL5O76039 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CDKL5O76039 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms