Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 GDI2P1-201ENST00000429312 1336 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
CACNA1FO60840 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CACNA1FO60840 AC004925.1-201ENST00000624256 2706 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CACNA1FO60840 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CACNA1FO60840 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CACNA1FO60840 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.14□□□□□ -1.91
CACNA1FO60840 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CACNA1FO60840 FTLP6-201ENST00000355274 422 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.14□□□□□ -1.91
CACNA1FO60840 USP9YP18-201ENST00000425912 695 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AC109583.1-201ENST00000432156 268 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AC010881.1-201ENST00000433830 235 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.14□□□□□ -1.91
CACNA1FO60840 RPL23AP45-201ENST00000476406 468 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 RPS27P27-201ENST00000498779 255 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 PRDX4P1-201ENST00000507189 574 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.14□□□□□ -1.91
CACNA1FO60840 AC098799.2-201ENST00000509466 868 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AC091133.4-201ENST00000511142 308 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AC103783.1-201ENST00000520506 373 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.14□□□□□ -1.91
CACNA1FO60840 CYCSP2-201ENST00000558168 301 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 RPL23AP84-201ENST00000571193 464 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 MIR4637-201ENST00000582405 84 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AC008687.2-201ENST00000597865 520 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AC063943.3-201ENST00000615562 356 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AL357080.1-201ENST00000617394 239 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CACNA1FO60840 MTCO1P24-201ENST00000515438 1558 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 CR848007.1-201ENST00000442354 1699 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CACNA1FO60840 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.13□□□□□ -1.91
CACNA1FO60840 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.13□□□□□ -1.91
CACNA1FO60840 AC016716.1-201ENST00000265882 708 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 OR4G2P-201ENST00000328113 903 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 RNU6-462P-201ENST00000362659 105 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.13□□□□□ -1.91
CACNA1FO60840 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CACNA1FO60840 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.13□□□□□ -1.91
CACNA1FO60840 MIR518C-201ENST00000384822 101 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 U8.14-201ENST00000390843 143 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.13□□□□□ -1.91
CACNA1FO60840 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.13□□□□□ -1.91
CACNA1FO60840 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.13□□□□□ -1.91
CACNA1FO60840 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.13□□□□□ -1.91
CACNA1FO60840 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.13□□□□□ -1.91
CACNA1FO60840 HSPE1P6-201ENST00000479457 291 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.13□□□□□ -1.91
CACNA1FO60840 AC106872.3-201ENST00000495104 446 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 RN7SL636P-201ENST00000497504 294 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 AC078918.1-201ENST00000498515 228 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.13□□□□□ -1.91
CACNA1FO60840 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.13□□□□□ -1.91
CACNA1FO60840 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.13□□□□□ -1.91
CACNA1FO60840 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.13□□□□□ -1.91
CACNA1FO60840 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.13□□□□□ -1.91
CACNA1FO60840 AC118273.2-201ENST00000532092 465 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.13□□□□□ -1.91
CACNA1FO60840 AC005730.3-201ENST00000583067 366 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 NRBF2P1-201ENST00000587407 859 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 AC115085.1-201ENST00000588924 229 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 BNIP3P23-201ENST00000599655 511 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.13□□□□□ -1.91
CACNA1FO60840 AC108479.2-201ENST00000617314 601 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 AC068722.2-201ENST00000618734 544 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.13□□□□□ -1.91
CACNA1FO60840 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.13□□□□□ -1.91
CACNA1FO60840 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CACNA1FO60840 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.13□□□□□ -1.91
CACNA1FO60840 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.13□□□□□ -1.91
CACNA1FO60840 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CACNA1FO60840 SNORA51.12-201ENST00000384448 134 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CACNA1FO60840 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.12□□□□□ -1.91
CACNA1FO60840 AC073264.1-201ENST00000411508 416 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.12□□□□□ -1.91
CACNA1FO60840 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.12□□□□□ -1.91
CACNA1FO60840 AC244505.5-201ENST00000443639 207 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 MTCO1P27-201ENST00000448269 226 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.12□□□□□ -1.91
CACNA1FO60840 RPS15AP1-201ENST00000457423 391 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 RPS27AP1-201ENST00000475545 471 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CACNA1FO60840 FAM172BP-201ENST00000487497 1089 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.12□□□□□ -1.91
CACNA1FO60840 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.12□□□□□ -1.91
CACNA1FO60840 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.12□□□□□ -1.91
CACNA1FO60840 RN7SKP234-201ENST00000517173 224 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 RN7SKP283-201ENST00000517197 270 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 AP001506.1-201ENST00000615444 211 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.12□□□□□ -1.91
CACNA1FO60840 AC093591.3-201ENST00000634516 308 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.12□□□□□ -1.91
CACNA1FO60840 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CACNA1FO60840 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CACNA1FO60840 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms