Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
GFRA3O60609 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.32□□□□□ -1.56
GFRA3O60609 AC011504.1-201ENST00000623331 4103 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.32□□□□□ -1.56
GFRA3O60609 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.32□□□□□ -1.56
GFRA3O60609 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.32□□□□□ -1.56
GFRA3O60609 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA3O60609 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.31□□□□□ -1.56
GFRA3O60609 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.31□□□□□ -1.56
GFRA3O60609 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA3O60609 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.31□□□□□ -1.56
GFRA3O60609 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA3O60609 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA3O60609 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA3O60609 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
GFRA3O60609 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA3O60609 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
GFRA3O60609 RNU6-1125P-201ENST00000363601 107 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 RNU6-525P-201ENST00000363685 104 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 RNU6-801P-201ENST00000364087 105 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 SNORA70H-201ENST00000383910 135 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 SNORA70J-201ENST00000384182 135 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 Y_RNA.544-201ENST00000384650 113 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 CBX3P9-201ENST00000402326 552 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 MIR1302-5-201ENST00000408164 150 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.31□□□□□ -1.56
GFRA3O60609 MLLT10P1-201ENST00000418346 262 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 AC140172.1-201ENST00000502928 141 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 AC090142.3-201ENST00000519012 385 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.31□□□□□ -1.56
GFRA3O60609 AC005476.1-201ENST00000554427 397 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.31□□□□□ -1.56
GFRA3O60609 AC106785.1-201ENST00000565935 262 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 AC010999.1-201ENST00000611856 324 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 AL391903.3-201ENST00000612158 163 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 AL357075.2-201ENST00000614906 189 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 AL391261.4-201ENST00000616012 481 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 AC013791.1-201ENST00000616619 62 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.31□□□□□ -1.56
GFRA3O60609 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.31□□□□□ -1.56
GFRA3O60609 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.31□□□□□ -1.56
GFRA3O60609 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA3O60609 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA3O60609 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.31□□□□□ -1.56
GFRA3O60609 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA3O60609 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA3O60609 AC083843.2-201ENST00000568248 6253 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 AC027228.2-201ENST00000567141 2154 ntBASIC5.31□□□□□ -1.56
GFRA3O60609 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
GFRA3O60609 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA3O60609 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
GFRA3O60609 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA3O60609 AL591135.1-201ENST00000401578 5914 ntBASIC5.3□□□□□ -1.56
GFRA3O60609 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA3O60609 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA3O60609 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
GFRA3O60609 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA3O60609 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA3O60609 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.3□□□□□ -1.56
GFRA3O60609 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.3□□□□□ -1.56
GFRA3O60609 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
GFRA3O60609 RNU6-428P-201ENST00000362942 107 ntBASIC5.3□□□□□ -1.56
GFRA3O60609 MIR600-201ENST00000385007 98 ntBASIC5.3□□□□□ -1.56
GFRA3O60609 MIR153-2-201ENST00000385225 87 ntBASIC5.3□□□□□ -1.56
GFRA3O60609 MT-TT-201ENST00000387460 66 ntBASIC5.3□□□□□ -1.56
GFRA3O60609 RNA5SP171-201ENST00000391071 115 ntBASIC5.3□□□□□ -1.56
GFRA3O60609 RNU2-22P-201ENST00000411266 212 ntBASIC5.3□□□□□ -1.56
GFRA3O60609 AC112498.1-201ENST00000444401 332 ntBASIC5.3□□□□□ -1.56
GFRA3O60609 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC5.3□□□□□ -1.56
GFRA3O60609 AC023424.1-201ENST00000496058 459 ntBASIC5.3□□□□□ -1.56
GFRA3O60609 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.3□□□□□ -1.56
GFRA3O60609 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.3□□□□□ -1.56
GFRA3O60609 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.3□□□□□ -1.56
GFRA3O60609 AC025166.1-201ENST00000612411 163 ntBASIC5.3□□□□□ -1.56
GFRA3O60609 AL590808.1-201ENST00000618696 141 ntBASIC5.3□□□□□ -1.56
GFRA3O60609 AC073869.8-201ENST00000641806 335 ntBASIC5.3□□□□□ -1.56
GFRA3O60609 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC5.3□□□□□ -1.56
GFRA3O60609 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA3O60609 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.3□□□□□ -1.56
GFRA3O60609 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
GFRA3O60609 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA3O60609 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.29□□□□□ -1.56
GFRA3O60609 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.29□□□□□ -1.56
GFRA3O60609 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.29□□□□□ -1.56
GFRA3O60609 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA3O60609 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA3O60609 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA3O60609 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.29□□□□□ -1.56
GFRA3O60609 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.29□□□□□ -1.56
GFRA3O60609 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
GFRA3O60609 RN7SKP145-201ENST00000363291 303 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 U3.9-201ENST00000363823 204 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 SNORA70.4-201ENST00000365509 134 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA3O60609 MIR135A2-201ENST00000384854 100 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 HLFP1-201ENST00000402375 499 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 RNU2-54P-201ENST00000410299 190 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms