Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SRGAP3O43295 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SRGAP3O43295 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SRGAP3O43295 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SRGAP3O43295 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SRGAP3O43295 AC121333.1-201ENST00000567488 2709 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SRGAP3O43295 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SRGAP3O43295 RNA5SP502-201ENST00000362694 119 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 RNU6-1078P-201ENST00000364522 103 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 SNORD115-7-201ENST00000365306 82 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 SNORA24.1-201ENST00000384401 135 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 RNU6-601P-201ENST00000384540 107 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 Y_RNA.576-201ENST00000384781 102 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 HLFP1-201ENST00000402375 499 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 POLHP1-201ENST00000411806 470 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 AC114491.1-201ENST00000416095 246 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 SNRPEP4-201ENST00000435815 279 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 AC016696.1-201ENST00000446949 318 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 BTF3P15-201ENST00000455606 336 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 ELOCP24-201ENST00000456370 334 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.68□□□□□ -1.66
SRGAP3O43295 AC104806.1-201ENST00000508720 308 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.68□□□□□ -1.66
SRGAP3O43295 AC016065.2-201ENST00000514530 444 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.68□□□□□ -1.66
SRGAP3O43295 AC023632.4-201ENST00000517783 191 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.68□□□□□ -1.66
SRGAP3O43295 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.68□□□□□ -1.66
SRGAP3O43295 RANP9-201ENST00000519957 271 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 IGLVIV-53-201ENST00000520107 367 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.68□□□□□ -1.66
SRGAP3O43295 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SRGAP3O43295 AL117187.1-201ENST00000555482 181 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 AL360157.1-201ENST00000565962 87 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.68□□□□□ -1.66
SRGAP3O43295 AF038458.1-201ENST00000588406 262 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.68□□□□□ -1.66
SRGAP3O43295 AL355598.1-201ENST00000604169 202 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 RNU1-30P-201ENST00000606575 163 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 DUSP12P1-201ENST00000612874 516 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 AL157817.1-201ENST00000614264 790 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 AL121772.2-201ENST00000614331 297 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 AC074140.1-201ENST00000621617 208 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.68□□□□□ -1.66
SRGAP3O43295 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SRGAP3O43295 AC066616.2-201ENST00000559334 1481 ntBASIC4.68□□□□□ -1.66
SRGAP3O43295 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SRGAP3O43295 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SRGAP3O43295 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SRGAP3O43295 AC093535.2-201ENST00000624769 2326 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SRGAP3O43295 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SRGAP3O43295 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SRGAP3O43295 RNA5SP124-201ENST00000362739 110 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 Y_RNA.112-201ENST00000363250 102 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SRGAP3O43295 AC117470.1-201ENST00000381974 330 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 RNU6-505P-201ENST00000384427 107 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 MIR554-201ENST00000384874 96 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 RNU2-21P-201ENST00000410368 188 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 RNA5SP107-201ENST00000411358 122 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 RPS12P24-201ENST00000412619 387 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.67□□□□□ -1.66
SRGAP3O43295 AC093106.2-201ENST00000428212 385 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.67□□□□□ -1.66
SRGAP3O43295 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.67□□□□□ -1.66
SRGAP3O43295 TXNP1-201ENST00000441872 371 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.67□□□□□ -1.66
SRGAP3O43295 Z95327.1-201ENST00000446082 482 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 AC239809.1-201ENST00000450470 217 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 RN7SL809P-201ENST00000482040 297 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 AC020593.1-201ENST00000507399 299 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 RNU6-1213P-201ENST00000517075 94 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.67□□□□□ -1.66
SRGAP3O43295 AC009902.1-201ENST00000519351 183 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.67□□□□□ -1.66
SRGAP3O43295 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.67□□□□□ -1.66
SRGAP3O43295 MIR5187-201ENST00000583479 76 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 MIR3672-201ENST00000584290 82 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 VN1R107P-201ENST00000601784 209 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.67□□□□□ -1.66
SRGAP3O43295 AC083806.3-201ENST00000614016 455 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 AC123768.4-201ENST00000616244 701 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.67□□□□□ -1.66
SRGAP3O43295 AL049641.1-201ENST00000441055 1948 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.67□□□□□ -1.66
SRGAP3O43295 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.67□□□□□ -1.66
SRGAP3O43295 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.67□□□□□ -1.66
SRGAP3O43295 ZNF734P-201ENST00000419494 1534 ntBASIC4.67□□□□□ -1.66
SRGAP3O43295 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SRGAP3O43295 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SRGAP3O43295 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SRGAP3O43295 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SRGAP3O43295 RNU6-61P-201ENST00000365528 109 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 RNU5E-6P-201ENST00000365574 115 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 RNU6-432P-201ENST00000384196 109 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 MIR568-201ENST00000385036 95 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 EIF4E2P1-201ENST00000393781 255 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms