Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MIR153-2-201ENST00000385225 87 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 AL356776.1-201ENST00000406574 447 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 ZNF90P2-204ENST00000419323 1075 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
COL6A5A8TX70 RPL31P63-201ENST00000422565 375 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 AL590233.1-201ENST00000430017 456 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
COL6A5A8TX70 RNA5SP57-201ENST00000459463 123 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 RNU1-104P-201ENST00000517280 175 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.81□□□□□ -2.28
COL6A5A8TX70 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.81□□□□□ -2.28
COL6A5A8TX70 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.81□□□□□ -2.28
COL6A5A8TX70 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 AC009229.3-201ENST00000608056 282 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 AC020658.4-201ENST00000613987 684 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 AC116618.1-201ENST00000634617 774 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 Y_RNA.100-201ENST00000363141 102 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 RNU4-38P-201ENST00000364472 129 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 AC244636.1-201ENST00000421152 228 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 AL512661.1-201ENST00000434586 1253 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 AL121601.2-201ENST00000438019 707 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 AC104692.1-201ENST00000472406 90 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
COL6A5A8TX70 AC113155.1-201ENST00000511141 769 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.8□□□□□ -2.28
COL6A5A8TX70 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.8□□□□□ -2.28
COL6A5A8TX70 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.8□□□□□ -2.28
COL6A5A8TX70 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC0.8□□□□□ -2.28
COL6A5A8TX70 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.8□□□□□ -2.28
COL6A5A8TX70 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
COL6A5A8TX70 RNU6-203P-201ENST00000384038 104 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 Y_RNA.453-201ENST00000384223 109 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 RNU6-700P-201ENST00000391043 107 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.8□□□□□ -2.28
COL6A5A8TX70 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 AC004865.1-201ENST00000442276 1003 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 RPS26P56-201ENST00000444468 240 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.8□□□□□ -2.28
COL6A5A8TX70 RPL26P9-201ENST00000457466 433 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 AC096751.1-202ENST00000502691 1067 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 MTCYBP35-201ENST00000503630 1137 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 AC067942.3-201ENST00000512025 362 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 OR6C7P-201ENST00000547875 934 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.8□□□□□ -2.28
COL6A5A8TX70 MIR4711-201ENST00000578274 70 ntBASIC0.8□□□□□ -2.28
COL6A5A8TX70 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
COL6A5A8TX70 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.8□□□□□ -2.28
COL6A5A8TX70 MIR524-201ENST00000385242 87 ntBASIC0.79□□□□□ -2.28
COL6A5A8TX70 AL355497.1-201ENST00000406262 551 ntBASIC0.79□□□□□ -2.28
COL6A5A8TX70 SNORD23.1-201ENST00000408212 104 ntBASIC0.79□□□□□ -2.28
COL6A5A8TX70 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.79□□□□□ -2.28
COL6A5A8TX70 SNORD121B-201ENST00000458838 81 ntBASIC0.79□□□□□ -2.28
COL6A5A8TX70 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.79□□□□□ -2.28
COL6A5A8TX70 AP000776.1-201ENST00000530032 1663 ntBASIC0.79□□□□□ -2.28
COL6A5A8TX70 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
COL6A5A8TX70 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
COL6A5A8TX70 RNU6-1235P-201ENST00000384559 107 ntBASIC0.79□□□□□ -2.28
COL6A5A8TX70 SSR1P1-201ENST00000407630 814 ntBASIC0.79□□□□□ -2.28
COL6A5A8TX70 HMGN2P30-201ENST00000423237 256 ntBASIC0.79□□□□□ -2.28
COL6A5A8TX70 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.79□□□□□ -2.28
COL6A5A8TX70 RNU6-498P-201ENST00000459468 107 ntBASIC0.79□□□□□ -2.28
COL6A5A8TX70 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.79□□□□□ -2.28
COL6A5A8TX70 AC010889.1-201ENST00000566193 2666 ntBASIC0.78□□□□□ -2.28
COL6A5A8TX70 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
COL6A5A8TX70 RNA5SP212-201ENST00000391223 107 ntBASIC0.78□□□□□ -2.28
COL6A5A8TX70 AC097499.1-201ENST00000444277 208 ntBASIC0.78□□□□□ -2.28
COL6A5A8TX70 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.78□□□□□ -2.28
COL6A5A8TX70 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.78□□□□□ -2.28
COL6A5A8TX70 AC083923.1-201ENST00000523708 376 ntBASIC0.78□□□□□ -2.28
COL6A5A8TX70 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.78□□□□□ -2.28
COL6A5A8TX70 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.78□□□□□ -2.28
COL6A5A8TX70 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC0.78□□□□□ -2.28
COL6A5A8TX70 NACAP2-201ENST00000318548 624 ntBASIC0.78□□□□□ -2.29
COL6A5A8TX70 SUMO2P12-201ENST00000405924 140 ntBASIC0.78□□□□□ -2.29
COL6A5A8TX70 MIR1285-1-201ENST00000408593 84 ntBASIC0.78□□□□□ -2.29
COL6A5A8TX70 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.78□□□□□ -2.29
COL6A5A8TX70 SNORA31.23-201ENST00000517219 133 ntBASIC0.78□□□□□ -2.29
COL6A5A8TX70 SMARCE1P4-201ENST00000523647 241 ntBASIC0.78□□□□□ -2.29
COL6A5A8TX70 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.78□□□□□ -2.29
COL6A5A8TX70 FAM106CP-201ENST00000582212 507 ntBASIC0.78□□□□□ -2.29
COL6A5A8TX70 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.29
COL6A5A8TX70 SNRPGP17-201ENST00000603780 214 ntBASIC0.78□□□□□ -2.29
COL6A5A8TX70 MIR7974-201ENST00000615835 79 ntBASIC0.78□□□□□ -2.29
COL6A5A8TX70 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.78□□□□□ -2.29
COL6A5A8TX70 AC079597.1-201ENST00000624306 508 ntBASIC0.78□□□□□ -2.29
COL6A5A8TX70 MTND2P2-201ENST00000434633 945 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.77□□□□□ -2.29
COL6A5A8TX70 AC112198.4-201ENST00000515450 351 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 PRELID3BP4-201ENST00000515476 571 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 AP004607.1-201ENST00000524456 203 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.77□□□□□ -2.29
COL6A5A8TX70 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.77□□□□□ -2.29
COL6A5A8TX70 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.77□□□□□ -2.29
COL6A5A8TX70 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.77□□□□□ -2.29
COL6A5A8TX70 AC108676.2-201ENST00000605225 163 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 AL133507.1-201ENST00000605269 557 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 AC092140.2-201ENST00000618027 521 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 AC006249.1-201ENST00000621223 471 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms