Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 AL121576.1-201ENST00000556055 276 ntBASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 AC005668.1-201ENST00000571142 476 ntBASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 MIR4742-201ENST00000581069 85 ntBASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 MIR4795-201ENST00000584182 89 ntBASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 AC020914.4-201ENST00000597690 277 ntBASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 AC021646.1-201ENST00000605469 484 ntBASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 SNORA62.6-201ENST00000606322 83 ntBASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 AL365204.3-201ENST00000612448 685 ntBASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 AC012409.4-201ENST00000612923 249 ntBASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 TPTEP1-208ENST00000636884 213 ntBASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPDC1A2A3K4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 Y_RNA.373-201ENST00000365600 103 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 RPL21P109-201ENST00000422213 475 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 RPS6P12-201ENST00000432491 726 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 RPL21P112-201ENST00000434403 463 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 AC020550.1-201ENST00000447385 163 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 FABP5P13-201ENST00000452144 328 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 RNU6-329P-201ENST00000459618 107 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 KLHL2P1-201ENST00000508691 521 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 FAM206BP-201ENST00000510179 541 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 TTC39CP1-201ENST00000512513 755 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 GMPSP1-201ENST00000514075 579 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 RN7SKP258-201ENST00000517151 304 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 AC109635.4-202ENST00000531666 412 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 AL118558.2-201ENST00000556294 238 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 AC012182.1-201ENST00000570133 895 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 AC067852.3-201ENST00000589177 561 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 SNRPGP15-201ENST00000600149 222 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 AC104763.2-201ENST00000604179 382 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 AC006504.1-201ENST00000562493 3666 ntBASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPDC1A2A3K4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PTPDC1A2A3K4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTPDC1A2A3K4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTPDC1A2A3K4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 U3.12-201ENST00000364498 214 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 SNORA51.2-201ENST00000364595 132 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 RNU6-1011P-201ENST00000384668 107 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 RPS20P15-201ENST00000412792 311 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 BX323014.1-201ENST00000412876 237 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 AL139247.1-201ENST00000422768 325 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 RPL7L1P10-201ENST00000427790 463 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 AC079780.1-201ENST00000428259 207 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 RNU6-1208P-201ENST00000459588 107 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 CCDC34P1-201ENST00000507441 517 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 RNU1-95P-201ENST00000516357 160 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 RNU1-128P-201ENST00000516704 160 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 BDH2P1-201ENST00000602288 736 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 AC008739.3-201ENST00000603262 127 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 AC025946.2-201ENST00000603398 234 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 AC007619.2-201ENST00000605743 379 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 AC092807.2-201ENST00000609367 243 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 RMST_9.1-201ENST00000619945 193 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 RMST_7.1-201ENST00000621935 268 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 AL034408.1-202ENST00000636088 415 ntBASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.4□□□□□ -1.71
PTPDC1A2A3K4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 RNU6-82P-201ENST00000363970 107 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 RNU6-173P-201ENST00000364215 104 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 SNORA36C-201ENST00000384289 132 ntBASIC4.39□□□□□ -1.71
PTPDC1A2A3K4 RNU6-831P-201ENST00000384548 107 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms