Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC016691.1-201ENST00000441321 413 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 AC124916.1-201ENST00000444020 547 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 CBWD4P-201ENST00000445695 655 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 KLF3P2-201ENST00000465138 268 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 DYNLL1P5-201ENST00000467158 270 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 RN7SL429P-201ENST00000479090 223 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 RN7SL489P-201ENST00000486185 223 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 RN7SL327P-201ENST00000488659 223 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 RPS29P20-201ENST00000489592 171 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 RANP3-201ENST00000530970 276 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 CYB5AP5-201ENST00000549779 389 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 MIR4448-201ENST00000584360 86 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 RN7SL853P-201ENST00000617250 223 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 AP000553.5-201ENST00000641933 54 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 AL359851.1-201ENST00000569460 4997 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 KPNA2P1-201ENST00000458289 1591 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 RNA5SP160-201ENST00000364866 120 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 RNU1-39P-201ENST00000383897 165 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 Y_RNA.408-201ENST00000383987 102 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AL079342.2-201ENST00000403367 482 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 SNORA11.2-201ENST00000408318 127 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 RNU2-42P-201ENST00000410697 113 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC023141.4-201ENST00000412031 328 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC096649.2-201ENST00000416186 393 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 MTCO1P3-201ENST00000429327 192 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 RPS15AP5-201ENST00000436276 388 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 SDCBPP1-201ENST00000440192 890 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 USP9YP8-201ENST00000441913 500 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC072039.1-201ENST00000477611 581 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC106872.3-201ENST00000495104 446 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 RN7SKP31-201ENST00000516354 278 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 RNA5SP364-201ENST00000516938 78 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC022861.1-201ENST00000522981 663 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 FAM92A1P1-201ENST00000528023 890 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 MIR5708-201ENST00000579723 85 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 MIR3945-201ENST00000581853 98 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 VN1R87P-201ENST00000596706 487 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC087241.4-201ENST00000612441 480 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC002550.2-201ENST00000621246 394 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC068880.4-201ENST00000623082 495 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC073592.7-201ENST00000623659 507 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AP003400.5-201ENST00000624827 617 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 AC091948.2-201ENST00000636510 279 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV41A0A0B4J266 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 RNU5B-4P-201ENST00000363508 111 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 Y_RNA.234-201ENST00000364409 97 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 RNA5SP88-201ENST00000365560 109 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AC019129.1-201ENST00000403786 261 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 RNU4-26P-201ENST00000410270 107 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AL161449.1-201ENST00000414531 1199 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 RPL23AP7-203ENST00000449021 469 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AL513124.1-201ENST00000450410 614 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 MTND2P24-201ENST00000453434 806 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AC105252.1-201ENST00000503089 286 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 RNU1-41P-201ENST00000516161 162 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 RNU1-48P-201ENST00000516400 162 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms