Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AL133241.1-201ENST00000556832 487 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC025918.2-201ENST00000558683 763 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC008121.1-201ENST00000603244 268 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC010738.1-201ENST00000604970 987 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC097504.2-201ENST00000608088 454 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 MTND5P31-201ENST00000419366 1374 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 MIR421-201ENST00000365696 85 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 MIR649-201ENST00000384843 97 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 RNU6-272P-201ENST00000411028 104 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 VTA1P1-201ENST00000414044 866 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 MRPL35P3-201ENST00000421557 364 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 SLC44A3-AS1-205ENST00000424505 612 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 UBE2V1P5-201ENST00000440070 405 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 AC068135.1-201ENST00000446164 246 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 RNU5A-7P-201ENST00000515979 116 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 OR5AL2P-201ENST00000532185 920 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 TRAV11-201ENST00000539512 339 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 AC105224.1-201ENST00000587055 421 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 AL137246.1-201ENST00000607072 977 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 AC109454.4-201ENST00000623411 649 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 AL049641.1-201ENST00000441055 1948 ntBASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
TRAV1-2A0A0B4J238 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 MIR126-201ENST00000362291 85 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 SNORA22-201ENST00000383907 134 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 RNU6-444P-201ENST00000383988 108 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 SNORA22C-201ENST00000384614 134 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 TAF9BP2-201ENST00000400856 499 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AL589655.1-201ENST00000405398 482 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 RN7SKP158-201ENST00000410453 326 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 SPA17P1-201ENST00000416656 452 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AL158823.1-201ENST00000418441 478 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AL512844.2-201ENST00000433990 593 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AC080013.2-201ENST00000460866 323 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AC114786.4-201ENST00000508771 728 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 LTV1P1-201ENST00000510683 1237 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AC114797.1-201ENST00000514003 728 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AL391261.3-201ENST00000557194 520 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AC087465.1-201ENST00000560574 245 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 MIR4421-201ENST00000578133 69 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 MIR4303-201ENST00000581299 66 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 MIR4295-201ENST00000585286 85 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AC013553.2-201ENST00000604244 589 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AC138473.1-201ENST00000605717 526 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AL021997.1-201ENST00000605757 193 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 uc_338.12-201ENST00000616344 181 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AC025048.6-202ENST00000627667 438 ntBASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC0.94□□□□□ -2.26
TRAV1-2A0A0B4J238 AC007785.2-201ENST00000598627 1916 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 SNORA62.1-201ENST00000364287 154 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 MIR325-201ENST00000385260 98 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 MIR1290-201ENST00000408735 78 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 AC023141.4-201ENST00000412031 328 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 AL009174.1-201ENST00000426577 416 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 HMGB1P27-201ENST00000431429 603 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 HMGB3P12-201ENST00000438745 556 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 RAC1P7-201ENST00000445367 377 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 BMI1P1-201ENST00000445879 941 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 RPL23AP6-201ENST00000446637 472 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 MRPS17P3-201ENST00000465453 385 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 RPL36AP21-201ENST00000490372 323 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 MIR892C-201ENST00000516410 77 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 SCARNA3-201ENST00000517097 143 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 OR5AK1P-201ENST00000524837 922 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 OR8K4P-201ENST00000534608 872 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 LINC00933-203ENST00000559812 219 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 MIR3199-1-201ENST00000582434 88 ntBASIC0.93□□□□□ -2.26
TRAV1-2A0A0B4J238 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms