Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 PGM5P4-201ENST00000421970 445 ntBASIC17.37■□□□□ 0.37
HPS1Q92902 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
HPS1Q92902 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.37■□□□□ 0.37
HPS1Q92902 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.37■□□□□ 0.37
HPS1Q92902 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.37■□□□□ 0.37
HPS1Q92902 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.37■□□□□ 0.37
HPS1Q92902 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.37■□□□□ 0.37
HPS1Q92902 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.37■□□□□ 0.37
HPS1Q92902 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.37■□□□□ 0.37
HPS1Q92902 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.37■□□□□ 0.37
HPS1Q92902 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.36■□□□□ 0.37
HPS1Q92902 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.36■□□□□ 0.37
HPS1Q92902 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
HPS1Q92902 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 AC092720.2-201ENST00000602388 1665 ntBASIC17.36■□□□□ 0.37
HPS1Q92902 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 AC067852.2-201ENST00000590513 2313 ntBASIC17.36■□□□□ 0.37
HPS1Q92902 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HPS1Q92902 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.36■□□□□ 0.37
HPS1Q92902 AC091874.3-201ENST00000512672 1195 ntBASIC17.36■□□□□ 0.37
HPS1Q92902 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.36■□□□□ 0.37
HPS1Q92902 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
HPS1Q92902 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
HPS1Q92902 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.36■□□□□ 0.37
HPS1Q92902 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
HPS1Q92902 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
HPS1Q92902 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HPS1Q92902 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS1Q92902 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
HPS1Q92902 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.35■□□□□ 0.37
HPS1Q92902 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
HPS1Q92902 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.35■□□□□ 0.37
HPS1Q92902 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HPS1Q92902 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HPS1Q92902 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.35■□□□□ 0.37
HPS1Q92902 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.35■□□□□ 0.37
HPS1Q92902 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HPS1Q92902 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.35■□□□□ 0.37
HPS1Q92902 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.35■□□□□ 0.37
HPS1Q92902 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
HPS1Q92902 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.35■□□□□ 0.37
HPS1Q92902 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.35■□□□□ 0.37
HPS1Q92902 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HPS1Q92902 AC083880.1-201ENST00000608266 535 ntBASIC17.35■□□□□ 0.37
HPS1Q92902 AC100791.3-201ENST00000617619 330 ntBASIC17.35■□□□□ 0.37
HPS1Q92902 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.35■□□□□ 0.37
HPS1Q92902 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.35■□□□□ 0.37
HPS1Q92902 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
HPS1Q92902 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.35■□□□□ 0.37
HPS1Q92902 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.35■□□□□ 0.37
HPS1Q92902 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms