Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.59■■□□□ 1.05
USP6NLQ92738 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP6NLQ92738 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP6NLQ92738 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP6NLQ92738 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.59■■□□□ 1.05
USP6NLQ92738 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.59■■□□□ 1.05
USP6NLQ92738 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP6NLQ92738 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.59■■□□□ 1.05
USP6NLQ92738 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP6NLQ92738 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP6NLQ92738 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.59■■□□□ 1.05
USP6NLQ92738 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
USP6NLQ92738 FAAHP1-202ENST00000446499 1238 ntBASIC21.59■■□□□ 1.05
USP6NLQ92738 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.59■■□□□ 1.05
USP6NLQ92738 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.59■■□□□ 1.05
USP6NLQ92738 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP6NLQ92738 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
USP6NLQ92738 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.59■■□□□ 1.05
USP6NLQ92738 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP6NLQ92738 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP6NLQ92738 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP6NLQ92738 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.59■■□□□ 1.05
USP6NLQ92738 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP6NLQ92738 SLC25A24-204ENST00000569674 2357 ntBASIC21.59■■□□□ 1.05
USP6NLQ92738 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.59■■□□□ 1.05
USP6NLQ92738 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP6NLQ92738 AL162377.1-201ENST00000618844 1793 ntBASIC21.59■■□□□ 1.05
USP6NLQ92738 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP6NLQ92738 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP6NLQ92738 AL512408.1-201ENST00000569378 2000 ntBASIC21.58■■□□□ 1.05
USP6NLQ92738 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USP6NLQ92738 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.58■■□□□ 1.05
USP6NLQ92738 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP6NLQ92738 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP6NLQ92738 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
USP6NLQ92738 AC004870.1-201ENST00000315132 882 ntBASIC21.58■■□□□ 1.05
USP6NLQ92738 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
USP6NLQ92738 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USP6NLQ92738 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.58■■□□□ 1.05
USP6NLQ92738 AL023284.2-201ENST00000405850 579 ntBASIC21.58■■□□□ 1.05
USP6NLQ92738 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USP6NLQ92738 HLA-F-220ENST00000434407 884 ntBASIC21.58■■□□□ 1.05
USP6NLQ92738 NUS1P1-201ENST00000446295 882 ntBASIC21.58■■□□□ 1.05
USP6NLQ92738 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.58■■□□□ 1.05
USP6NLQ92738 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.58■■□□□ 1.05
USP6NLQ92738 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USP6NLQ92738 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.58■■□□□ 1.05
USP6NLQ92738 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP6NLQ92738 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP6NLQ92738 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
USP6NLQ92738 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.58■■□□□ 1.04
USP6NLQ92738 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
USP6NLQ92738 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
USP6NLQ92738 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.58■■□□□ 1.04
USP6NLQ92738 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
USP6NLQ92738 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP6NLQ92738 AL162741.1-201ENST00000565563 1558 ntBASIC21.57■■□□□ 1.04
USP6NLQ92738 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.57■■□□□ 1.04
USP6NLQ92738 KRT8P10-201ENST00000450021 1447 ntBASIC21.57■■□□□ 1.04
USP6NLQ92738 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP6NLQ92738 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.57■■□□□ 1.04
USP6NLQ92738 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
USP6NLQ92738 SEC1P-202ENST00000473944 940 ntBASIC21.57■■□□□ 1.04
USP6NLQ92738 KRT8P26-201ENST00000534154 1276 ntBASIC21.57■■□□□ 1.04
USP6NLQ92738 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.57■■□□□ 1.04
USP6NLQ92738 AP002414.4-201ENST00000589764 1148 ntBASIC21.57■■□□□ 1.04
USP6NLQ92738 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.57■■□□□ 1.04
USP6NLQ92738 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP6NLQ92738 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP6NLQ92738 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
USP6NLQ92738 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP6NLQ92738 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.57■■□□□ 1.04
USP6NLQ92738 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.57■■□□□ 1.04
USP6NLQ92738 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
USP6NLQ92738 AC073314.1-201ENST00000568729 2216 ntBASIC21.56■■□□□ 1.04
USP6NLQ92738 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
USP6NLQ92738 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6NLQ92738 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.56■■□□□ 1.04
USP6NLQ92738 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
USP6NLQ92738 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6NLQ92738 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6NLQ92738 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.56■■□□□ 1.04
USP6NLQ92738 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.56■■□□□ 1.04
USP6NLQ92738 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
USP6NLQ92738 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
USP6NLQ92738 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.56■■□□□ 1.04
USP6NLQ92738 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6NLQ92738 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
USP6NLQ92738 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
USP6NLQ92738 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
USP6NLQ92738 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.55■■□□□ 1.04
USP6NLQ92738 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP6NLQ92738 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.55■■□□□ 1.04
USP6NLQ92738 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.55■■□□□ 1.04
USP6NLQ92738 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
USP6NLQ92738 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
USP6NLQ92738 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
USP6NLQ92738 AC093525.10-201ENST00000625130 1569 ntBASIC21.55■■□□□ 1.04
USP6NLQ92738 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP6NLQ92738 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms