Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 Mir6404-201ENSMUST00000183699 94 ntBASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp7Q8R1T1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp7Q8R1T1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp7Q8R1T1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp7Q8R1T1 Gm13036-201ENSMUST00000117799 748 ntBASIC20.73■□□□□ 0.91
Chmp7Q8R1T1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp7Q8R1T1 Gm12260-201ENSMUST00000122447 411 ntBASIC20.73■□□□□ 0.91
Chmp7Q8R1T1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.73■□□□□ 0.91
Chmp7Q8R1T1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp7Q8R1T1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp7Q8R1T1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp7Q8R1T1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp7Q8R1T1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp7Q8R1T1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp7Q8R1T1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Gm14140-201ENSMUST00000119999 995 ntBASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp7Q8R1T1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Gm27628-201ENSMUST00000184911 107 ntBASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp7Q8R1T1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.91
Chmp7Q8R1T1 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
Chmp7Q8R1T1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms