Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
VPS8Q8N3P4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC29.84■■■□□ 2.37
VPS8Q8N3P4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC29.84■■■□□ 2.37
VPS8Q8N3P4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC29.83■■■□□ 2.37
VPS8Q8N3P4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC29.83■■■□□ 2.37
VPS8Q8N3P4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
VPS8Q8N3P4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
VPS8Q8N3P4 AC104076.2-201ENST00000448912 469 ntBASIC29.83■■■□□ 2.37
VPS8Q8N3P4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC29.83■■■□□ 2.37
VPS8Q8N3P4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
VPS8Q8N3P4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC29.83■■■□□ 2.37
VPS8Q8N3P4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC29.83■■■□□ 2.37
VPS8Q8N3P4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC29.83■■■□□ 2.37
VPS8Q8N3P4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC29.83■■■□□ 2.37
VPS8Q8N3P4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
VPS8Q8N3P4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
VPS8Q8N3P4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC29.83■■■□□ 2.37
VPS8Q8N3P4 AL161938.1-201ENST00000569833 2180 ntBASIC29.82■■■□□ 2.36
VPS8Q8N3P4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
VPS8Q8N3P4 KATNBL1P6-202ENST00000562413 1466 ntBASIC29.82■■■□□ 2.36
VPS8Q8N3P4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC29.82■■■□□ 2.36
VPS8Q8N3P4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
VPS8Q8N3P4 LIN28AP1-201ENST00000429574 405 ntBASIC29.82■■■□□ 2.36
VPS8Q8N3P4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC29.82■■■□□ 2.36
VPS8Q8N3P4 AC009947.2-201ENST00000444014 672 ntBASIC29.82■■■□□ 2.36
VPS8Q8N3P4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC29.82■■■□□ 2.36
VPS8Q8N3P4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
VPS8Q8N3P4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
VPS8Q8N3P4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
VPS8Q8N3P4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
VPS8Q8N3P4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
VPS8Q8N3P4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
VPS8Q8N3P4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC29.81■■■□□ 2.36
VPS8Q8N3P4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
VPS8Q8N3P4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
VPS8Q8N3P4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC29.81■■■□□ 2.36
VPS8Q8N3P4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
VPS8Q8N3P4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC29.81■■■□□ 2.36
VPS8Q8N3P4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
VPS8Q8N3P4 ATP5G1P1-201ENST00000448724 379 ntBASIC29.81■■■□□ 2.36
VPS8Q8N3P4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC29.81■■■□□ 2.36
VPS8Q8N3P4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC29.81■■■□□ 2.36
VPS8Q8N3P4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
VPS8Q8N3P4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC29.81■■■□□ 2.36
VPS8Q8N3P4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
VPS8Q8N3P4 AL512353.2-201ENST00000448759 1962 ntBASIC29.81■■■□□ 2.36
VPS8Q8N3P4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
VPS8Q8N3P4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
VPS8Q8N3P4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC29.8■■■□□ 2.36
VPS8Q8N3P4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC29.8■■■□□ 2.36
VPS8Q8N3P4 YBX1P2-201ENST00000489612 999 ntBASIC29.8■■■□□ 2.36
VPS8Q8N3P4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC29.8■■■□□ 2.36
VPS8Q8N3P4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC29.8■■■□□ 2.36
VPS8Q8N3P4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC29.8■■■□□ 2.36
VPS8Q8N3P4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
VPS8Q8N3P4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
VPS8Q8N3P4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC29.8■■■□□ 2.36
VPS8Q8N3P4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
VPS8Q8N3P4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC29.8■■■□□ 2.36
VPS8Q8N3P4 SLC25A24-204ENST00000569674 2357 ntBASIC29.8■■■□□ 2.36
VPS8Q8N3P4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC29.8■■■□□ 2.36
VPS8Q8N3P4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
VPS8Q8N3P4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
VPS8Q8N3P4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
VPS8Q8N3P4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
VPS8Q8N3P4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC29.79■■■□□ 2.36
VPS8Q8N3P4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC29.79■■■□□ 2.36
VPS8Q8N3P4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
VPS8Q8N3P4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
VPS8Q8N3P4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC29.79■■■□□ 2.36
VPS8Q8N3P4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC29.79■■■□□ 2.36
VPS8Q8N3P4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC29.79■■■□□ 2.36
VPS8Q8N3P4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
VPS8Q8N3P4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
VPS8Q8N3P4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
VPS8Q8N3P4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
VPS8Q8N3P4 AL512604.3-201ENST00000569583 964 ntBASIC29.79■■■□□ 2.36
VPS8Q8N3P4 NEK4P2-201ENST00000580004 1012 ntBASIC29.79■■■□□ 2.36
VPS8Q8N3P4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
VPS8Q8N3P4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
VPS8Q8N3P4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC29.78■■■□□ 2.36
VPS8Q8N3P4 RCC2P3-201ENST00000418112 1537 ntBASIC29.78■■■□□ 2.36
VPS8Q8N3P4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
VPS8Q8N3P4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
VPS8Q8N3P4 ANKRD20A18P-201ENST00000359341 492 ntBASIC29.78■■■□□ 2.36
VPS8Q8N3P4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
VPS8Q8N3P4 AC022616.7-201ENST00000525383 220 ntBASIC29.78■■■□□ 2.36
VPS8Q8N3P4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC29.78■■■□□ 2.36
VPS8Q8N3P4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC29.78■■■□□ 2.36
VPS8Q8N3P4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC29.78■■■□□ 2.36
VPS8Q8N3P4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
VPS8Q8N3P4 KRT8P32-201ENST00000512863 1461 ntBASIC29.78■■■□□ 2.36
VPS8Q8N3P4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
VPS8Q8N3P4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
VPS8Q8N3P4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
VPS8Q8N3P4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
VPS8Q8N3P4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
VPS8Q8N3P4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
VPS8Q8N3P4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
VPS8Q8N3P4 MIR1224-201ENST00000408193 85 ntBASIC29.77■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms