Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC6P09630 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.56■■□□□ 1.04
HOXC6P09630 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC6P09630 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC6P09630 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC6P09630 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.56■■□□□ 1.04
HOXC6P09630 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.56■■□□□ 1.04
HOXC6P09630 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.56■■□□□ 1.04
HOXC6P09630 AC246785.2-201ENST00000432512 513 ntBASIC21.56■■□□□ 1.04
HOXC6P09630 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.56■■□□□ 1.04
HOXC6P09630 FDX1P1-201ENST00000449115 551 ntBASIC21.56■■□□□ 1.04
HOXC6P09630 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
HOXC6P09630 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC6P09630 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
HOXC6P09630 PRELID1P1-202ENST00000567272 903 ntBASIC21.56■■□□□ 1.04
HOXC6P09630 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.56■■□□□ 1.04
HOXC6P09630 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC6P09630 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC6P09630 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC6P09630 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.56■■□□□ 1.04
HOXC6P09630 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC6P09630 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC6P09630 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC6P09630 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC6P09630 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HOXC6P09630 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.56■■□□□ 1.04
HOXC6P09630 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC6P09630 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC6P09630 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.55■■□□□ 1.04
HOXC6P09630 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
HOXC6P09630 AL391422.3-201ENST00000603791 2761 ntBASIC21.55■■□□□ 1.04
HOXC6P09630 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC6P09630 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.55■■□□□ 1.04
HOXC6P09630 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC6P09630 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC6P09630 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.55■■□□□ 1.04
HOXC6P09630 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
HOXC6P09630 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC6P09630 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC6P09630 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC6P09630 AP002383.4-201ENST00000442518 975 ntBASIC21.55■■□□□ 1.04
HOXC6P09630 BX276092.5-203ENST00000456199 560 ntBASIC21.55■■□□□ 1.04
HOXC6P09630 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.55■■□□□ 1.04
HOXC6P09630 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.55■■□□□ 1.04
HOXC6P09630 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
HOXC6P09630 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.55■■□□□ 1.04
HOXC6P09630 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC6P09630 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
HOXC6P09630 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC6P09630 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC6P09630 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.55■■□□□ 1.04
HOXC6P09630 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.55■■□□□ 1.04
HOXC6P09630 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC6P09630 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC6P09630 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC6P09630 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC6P09630 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC6P09630 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.54■■□□□ 1.04
HOXC6P09630 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.54■■□□□ 1.04
HOXC6P09630 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.54■■□□□ 1.04
HOXC6P09630 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.54■■□□□ 1.04
HOXC6P09630 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.54■■□□□ 1.04
HOXC6P09630 LINC01521-201ENST00000504184 1943 ntBASIC21.54■■□□□ 1.04
HOXC6P09630 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.54■■□□□ 1.04
HOXC6P09630 ZNF815P-204ENST00000434898 1737 ntBASIC21.54■■□□□ 1.04
HOXC6P09630 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.54■■□□□ 1.04
HOXC6P09630 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC6P09630 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC6P09630 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
HOXC6P09630 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
HOXC6P09630 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.53■■□□□ 1.04
HOXC6P09630 AC099778.1-201ENST00000568593 1911 ntBASIC21.53■■□□□ 1.04
HOXC6P09630 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
HOXC6P09630 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.53■■□□□ 1.04
HOXC6P09630 AL023284.2-201ENST00000405850 579 ntBASIC21.53■■□□□ 1.04
HOXC6P09630 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.53■■□□□ 1.04
HOXC6P09630 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
HOXC6P09630 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.53■■□□□ 1.04
HOXC6P09630 AC111152.3-201ENST00000569699 673 ntBASIC21.53■■□□□ 1.04
HOXC6P09630 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.53■■□□□ 1.04
HOXC6P09630 AC024243.1-201ENST00000609234 778 ntBASIC21.53■■□□□ 1.04
HOXC6P09630 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.53■■□□□ 1.04
HOXC6P09630 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms