Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.79■■□□□ 1.08
ALDH1A1P00352 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.79■■□□□ 1.08
ALDH1A1P00352 AC005332.3-201ENST00000589904 676 ntBASIC21.79■■□□□ 1.08
ALDH1A1P00352 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.79■■□□□ 1.08
ALDH1A1P00352 AL773604.1-201ENST00000617417 272 ntBASIC21.79■■□□□ 1.08
ALDH1A1P00352 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.79■■□□□ 1.08
ALDH1A1P00352 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ALDH1A1P00352 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALDH1A1P00352 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ALDH1A1P00352 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALDH1A1P00352 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.79■■□□□ 1.08
ALDH1A1P00352 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ALDH1A1P00352 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ALDH1A1P00352 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ALDH1A1P00352 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ALDH1A1P00352 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
ALDH1A1P00352 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ALDH1A1P00352 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.78■■□□□ 1.08
ALDH1A1P00352 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
ALDH1A1P00352 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.78■■□□□ 1.08
ALDH1A1P00352 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ALDH1A1P00352 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ALDH1A1P00352 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ALDH1A1P00352 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.78■■□□□ 1.08
ALDH1A1P00352 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
ALDH1A1P00352 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.78■■□□□ 1.08
ALDH1A1P00352 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ALDH1A1P00352 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALDH1A1P00352 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALDH1A1P00352 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALDH1A1P00352 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.77■■□□□ 1.08
ALDH1A1P00352 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.77■■□□□ 1.08
ALDH1A1P00352 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALDH1A1P00352 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ALDH1A1P00352 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.77■■□□□ 1.08
ALDH1A1P00352 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALDH1A1P00352 IGHV3-47-201ENST00000425060 335 ntBASIC21.77■■□□□ 1.08
ALDH1A1P00352 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALDH1A1P00352 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC21.77■■□□□ 1.08
ALDH1A1P00352 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALDH1A1P00352 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALDH1A1P00352 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
ALDH1A1P00352 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ALDH1A1P00352 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ALDH1A1P00352 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.77■■□□□ 1.07
ALDH1A1P00352 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.77■■□□□ 1.07
ALDH1A1P00352 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ALDH1A1P00352 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ALDH1A1P00352 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ALDH1A1P00352 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ALDH1A1P00352 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.76■■□□□ 1.07
ALDH1A1P00352 AP003733.1-201ENST00000491725 852 ntBASIC21.76■■□□□ 1.07
ALDH1A1P00352 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.76■■□□□ 1.07
ALDH1A1P00352 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.76■■□□□ 1.07
ALDH1A1P00352 RNA5SP419-201ENST00000515908 135 ntBASIC21.76■■□□□ 1.07
ALDH1A1P00352 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.76■■□□□ 1.07
ALDH1A1P00352 AL390719.2-201ENST00000606993 987 ntBASIC21.76■■□□□ 1.07
ALDH1A1P00352 AC009237.14-201ENST00000609975 1594 ntBASIC21.76■■□□□ 1.07
ALDH1A1P00352 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.76■■□□□ 1.07
ALDH1A1P00352 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.76■■□□□ 1.07
ALDH1A1P00352 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.76■■□□□ 1.07
ALDH1A1P00352 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ALDH1A1P00352 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ALDH1A1P00352 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
ALDH1A1P00352 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ALDH1A1P00352 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ALDH1A1P00352 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ALDH1A1P00352 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ALDH1A1P00352 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ALDH1A1P00352 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ALDH1A1P00352 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ALDH1A1P00352 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ALDH1A1P00352 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.75■■□□□ 1.07
ALDH1A1P00352 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC21.75■■□□□ 1.07
ALDH1A1P00352 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.75■■□□□ 1.07
ALDH1A1P00352 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ALDH1A1P00352 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ALDH1A1P00352 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.75■■□□□ 1.07
ALDH1A1P00352 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ALDH1A1P00352 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ALDH1A1P00352 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.75■■□□□ 1.07
ALDH1A1P00352 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ALDH1A1P00352 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ALDH1A1P00352 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
ALDH1A1P00352 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
ALDH1A1P00352 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ALDH1A1P00352 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ALDH1A1P00352 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.74■■□□□ 1.07
ALDH1A1P00352 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ALDH1A1P00352 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
ALDH1A1P00352 RNPS1P1-201ENST00000507437 918 ntBASIC21.74■■□□□ 1.07
ALDH1A1P00352 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.74■■□□□ 1.07
ALDH1A1P00352 AF238378.1-201ENST00000526806 358 ntBASIC21.74■■□□□ 1.07
ALDH1A1P00352 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ALDH1A1P00352 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.74■■□□□ 1.07
ALDH1A1P00352 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.74■■□□□ 1.07
ALDH1A1P00352 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.74■■□□□ 1.07
ALDH1A1P00352 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ALDH1A1P00352 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.74■■□□□ 1.07
ALDH1A1P00352 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms