Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Mir1668-201ENSMUST00000184114 107 ntBASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Trbv17A0A140T8P8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv17A0A140T8P8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv17A0A140T8P8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv17A0A140T8P8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trbv17A0A140T8P8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv17A0A140T8P8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv17A0A140T8P8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv17A0A140T8P8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv17A0A140T8P8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv17A0A140T8P8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv17A0A140T8P8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv17A0A140T8P8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv17A0A140T8P8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Gm11336-201ENSMUST00000118168 334 ntBASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Gm13836-201ENSMUST00000121159 501 ntBASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv17A0A140T8P8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Gm10231-201ENSMUST00000181584 441 ntBASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Gm10175-202ENSMUST00000208752 441 ntBASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Gm21559-201ENSMUST00000220638 855 ntBASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms