Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-6A0A075B603 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Gm15378-201ENSMUST00000121894 207 ntBASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-6A0A075B603 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6-6A0A075B603 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Gm37025-201ENSMUST00000195159 829 ntBASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Gm43183-201ENSMUST00000200632 547 ntBASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav6-6A0A075B603 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms