Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 Y_RNA.689-201ENST00000516589 107 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 GNRHR2P1-201ENST00000555315 631 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 AC005951.2-201ENST00000576282 495 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 AC005261.5-201ENST00000596280 355 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 AC013553.2-201ENST00000604244 589 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 AL670379.4-201ENST00000605279 254 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 AC007619.2-201ENST00000605743 379 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 AC135507.2-201ENST00000612443 309 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 SNORA31-201ENST00000362607 130 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 RNA5SP502-201ENST00000362694 119 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 RNU6-14P-201ENST00000384630 106 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 MIR449B-201ENST00000384995 97 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 MIR514A1-201ENST00000385133 98 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 RNU6-550P-201ENST00000391057 101 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 snosnR66.1-201ENST00000391095 99 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 RPL23AP83-201ENST00000434984 473 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 TXNP1-201ENST00000441872 371 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 RPL7P12-201ENST00000446719 750 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AC087588.1-201ENST00000462203 316 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AC026726.1-201ENST00000512859 601 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 RNU6-123P-201ENST00000516163 102 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 PSMA2P1-201ENST00000526365 646 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AC023050.3-201ENST00000541142 333 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AC044792.1-201ENST00000593294 196 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AL158032.1-201ENST00000605401 106 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AC087045.1-201ENST00000605856 382 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AL390240.1-201ENST00000612950 384 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AL121772.2-201ENST00000614331 297 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 AC106871.1-201ENST00000568324 3102 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 LINC02471-203ENST00000641941 4752 ntBASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4□□□□□ -1.77
PCDHB1Q9Y5F3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 RNU4-20P-201ENST00000365601 151 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 AL592114.1-201ENST00000403842 483 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 RNA5SP306-201ENST00000411087 107 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 RNA5SP111-201ENST00000411386 101 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 AC080125.1-201ENST00000414888 684 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 AC004552.1-201ENST00000419089 348 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 AL591704.1-201ENST00000432574 275 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 PRDX3P3-201ENST00000447765 522 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 RPL37P6-201ENST00000460682 294 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 RPS26P3-201ENST00000470205 348 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 RPL7P49-201ENST00000471402 708 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 AC090543.2-201ENST00000483963 348 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 AC004057.1-201ENST00000485827 348 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 AL049874.1-201ENST00000489560 388 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 RPL31P61-201ENST00000496160 376 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 SCARNA15.2-201ENST00000516409 127 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 AC022690.1-201ENST00000526681 550 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 AP004242.1-201ENST00000533701 349 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 PSMA3P-201ENST00000555485 635 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 RPS3AP23-202ENST00000574601 686 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 DPPA3P3-201ENST00000603842 430 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 AL161756.2-201ENST00000604597 246 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 AC034102.8-201ENST00000615146 484 ntBASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms