Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC027309.3-201ENST00000623419 351 ntBASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 OR4G2P-202ENST00000641004 1759 ntBASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 RNU1-35P-201ENST00000362782 153 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 RNA5SP383-201ENST00000362934 120 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 RPS4XP7-201ENST00000406274 780 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 RNU6-1077P-201ENST00000410506 102 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 AL135786.1-201ENST00000415892 214 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 RPL23AP22-201ENST00000437556 453 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 RPL36AP33-201ENST00000450395 310 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 AL590639.1-201ENST00000456484 337 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 HMGN2P13-201ENST00000476476 274 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 AC124947.2-202ENST00000552735 133 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 AL355472.4-201ENST00000610233 626 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 Y_RNA.97-201ENST00000363094 102 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 RNU6-553P-201ENST00000364047 96 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 RN7SKP140-201ENST00000411196 284 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 AC078974.1-201ENST00000411597 223 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 AC108059.3-201ENST00000456388 214 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 RNU7-170P-201ENST00000459303 61 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 AC108210.2-201ENST00000503681 201 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 RNU6-1282P-201ENST00000516735 96 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 RNU6-201P-201ENST00000517100 61 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 MRPS36P5-201ENST00000551909 298 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 AC090888.1-201ENST00000561335 1141 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 AC078883.4-201ENST00000623218 367 ntBASIC5.2□□□□□ -1.58
SHROOM4Q9ULL8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 AL353746.1-201ENST00000566293 6881 ntBASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 RPL21P24-201ENST00000413752 448 ntBASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 AL390023.1-201ENST00000428836 262 ntBASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 MED14P1-201ENST00000430517 648 ntBASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 RPL30P5-201ENST00000494923 336 ntBASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 AF131216.2-201ENST00000512316 564 ntBASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 SNORA31.1-201ENST00000515993 133 ntBASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 SNORA31.5-201ENST00000516190 133 ntBASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 RNU6-390P-201ENST00000516259 103 ntBASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 RNU6-759P-201ENST00000516740 103 ntBASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 SDR42E1P2-201ENST00000614861 481 ntBASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 AC027807.2-201ENST00000616099 408 ntBASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 AC009159.1-201ENST00000618386 642 ntBASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 AC091931.1-201ENST00000623488 728 ntBASIC5.19□□□□□ -1.58
SHROOM4Q9ULL8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.18□□□□□ -1.58
SHROOM4Q9ULL8 Y_RNA.169-201ENST00000363745 96 ntBASIC5.18□□□□□ -1.58
SHROOM4Q9ULL8 RN7SKP58-201ENST00000411010 305 ntBASIC5.18□□□□□ -1.58
SHROOM4Q9ULL8 MTND2P18-201ENST00000419962 1030 ntBASIC5.18□□□□□ -1.58
SHROOM4Q9ULL8 BX276092.3-201ENST00000424182 230 ntBASIC5.18□□□□□ -1.58
SHROOM4Q9ULL8 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.18□□□□□ -1.58
SHROOM4Q9ULL8 MTCO3P45-201ENST00000443036 613 ntBASIC5.18□□□□□ -1.58
SHROOM4Q9ULL8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.18□□□□□ -1.58
SHROOM4Q9ULL8 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.18□□□□□ -1.58
SHROOM4Q9ULL8 CASP1P1-201ENST00000526345 212 ntBASIC5.18□□□□□ -1.58
SHROOM4Q9ULL8 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.18□□□□□ -1.58
SHROOM4Q9ULL8 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.18□□□□□ -1.58
SHROOM4Q9ULL8 AP001981.2-201ENST00000603241 418 ntBASIC5.18□□□□□ -1.58
SHROOM4Q9ULL8 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.18□□□□□ -1.58
SHROOM4Q9ULL8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 MTCYBP36-201ENST00000404146 440 ntBASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 RNA5SP425-201ENST00000410336 112 ntBASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 AL356320.1-201ENST00000429616 163 ntBASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 HMGB3P12-201ENST00000438745 556 ntBASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 BMI1P1-201ENST00000445879 941 ntBASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 ZNF114P1-201ENST00000453500 292 ntBASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 AC112204.1-201ENST00000502591 103 ntBASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 RNU6-711P-201ENST00000517255 106 ntBASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 AC106038.2-201ENST00000520706 568 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms