Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 RN7SKP159-201ENST00000410657 292 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 RNU6-516P-201ENST00000411381 104 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 RPL23AP50-201ENST00000434149 455 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 RPL35AP22-201ENST00000436855 335 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 RPS26P2-201ENST00000440331 348 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 AC073587.1-201ENST00000447093 876 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 NDUFS5P3-201ENST00000450668 321 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 SNORD127-201ENST00000458892 86 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 snoU13.22-201ENST00000459428 104 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 RPS23P3-201ENST00000470993 430 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 DEFB109F-201ENST00000491870 277 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 AC091516.1-201ENST00000549191 703 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 MIR3128-201ENST00000581957 66 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 MIR3158-1-201ENST00000583596 81 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 AC006254.3-201ENST00000603353 884 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 AC008162.1-201ENST00000604718 254 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 AL670379.4-201ENST00000605279 254 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 AL161423.1-201ENST00000613700 262 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 AC005086.4-201ENST00000623065 213 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 AC126323.6-202ENST00000568092 3511 ntBASIC4.46□□□□□ -1.7
MBD1Q9UIS9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
MBD1Q9UIS9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 MIR372-201ENST00000362225 67 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 Y_RNA.515-201ENST00000384535 112 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 SNORA41-201ENST00000384675 132 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 MIR548M-201ENST00000408260 86 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 CYCSP10-201ENST00000417973 294 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 RPL21P91-201ENST00000429231 479 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 NOTCH2P1-201ENST00000443481 624 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 PPIAP3-201ENST00000450588 505 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 AL591473.1-201ENST00000464297 313 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 RN7SL542P-201ENST00000467147 294 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 RN7SL432P-201ENST00000484057 298 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 IGHV3-76-201ENST00000522465 295 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 AC026371.1-201ENST00000551867 419 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 RPL23AP84-201ENST00000571193 464 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 HMGB2P1-201ENST00000591146 634 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 AC025588.3-201ENST00000604182 274 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 uc_338.13-201ENST00000618243 179 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 MIR6891-201ENST00000618788 93 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 AC011978.2-201ENST00000569835 2054 ntBASIC4.45□□□□□ -1.7
MBD1Q9UIS9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
MBD1Q9UIS9 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
MBD1Q9UIS9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.44□□□□□ -1.7
MBD1Q9UIS9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
MBD1Q9UIS9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
MBD1Q9UIS9 Y_RNA.60-201ENST00000362831 98 ntBASIC4.44□□□□□ -1.7
MBD1Q9UIS9 RNU6-1284P-201ENST00000363701 100 ntBASIC4.44□□□□□ -1.7
MBD1Q9UIS9 RNA5SP283-201ENST00000365604 119 ntBASIC4.44□□□□□ -1.7
MBD1Q9UIS9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
MBD1Q9UIS9 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.44□□□□□ -1.7
MBD1Q9UIS9 RNU6-946P-201ENST00000383878 107 ntBASIC4.44□□□□□ -1.7
MBD1Q9UIS9 RNU6-434P-201ENST00000384376 107 ntBASIC4.44□□□□□ -1.7
MBD1Q9UIS9 MT-TW-201ENST00000387382 68 ntBASIC4.44□□□□□ -1.7
MBD1Q9UIS9 AL109755.1-201ENST00000401791 649 ntBASIC4.44□□□□□ -1.7
MBD1Q9UIS9 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.44□□□□□ -1.7
MBD1Q9UIS9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms